| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1737 |
|---|
| Symbol | |
|---|
| ID | 6120974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1805258 |
|---|
| End bp | 1806163 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641649713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001776266 |
|---|
| Protein GI | 170730833 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2930] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGCC TACCATACTT AACCATGCTG CTGTCGCTTG CTCTTGCTGC TGGCCACGCG
TTCGCCGGCC CGGAAGAAGA CCAGCGCGCT CGCAATGCGC TACGCGTGCT GACCGAGCTT
CAGAAAATCC CAGAGCAAAC CATTCCAGAC AAACTGCTAG AAGAAGCACG TGCGATCGTC
ATCATTCCCG ACACGCTCAA AGTGGGCTTC ATCATTGGCG GACGCCGTGG CCAAGGCCTC
ATGTCGATCA AGACACCACA AAACACATGG TCTCAACCCG TATTTGTGAA ACTTACCGGC
GGCAGCATCG GCCTTCAAGC CGGCGTGCAA TCTTCCGACG TGGTACTCGT GTTCCGCAAT
GACCGCAACT TGGATAACAT CGTTAACGGG AAATTTACTC TTGGCGCAGA TGCCAGCGTG
GCCGCAGGTC CCGTTGGACG TAATGCGTTG GCAGCGACCG ATAGCGAGCT AAAGGCCGAG
ATCTACTCTT GGTCAACAGC GCGCGGCTTG TTTGCTGGTA TCGCTCTAGA CGGAGCCGCA
CTTCAAATCG ACGACAATGC CAACCTTGAC GTTTATGGCA AAGGCACGAC TCCACGTATG
ATTTTCGAAG GCCGAACCGC CGAACCTCCC TCCAGCGATG TGATCGCGTT CCGTGATCGC
CTGGAGGAAG TCACTTATAC AGCACGCAAT AACCGTAATA AGACCACAAA ACAAAGTGGA
TGGAATCAGC ACACCAGCAC ACCCAGGCCT GGCACAACAG TGAGAGTGAC ACCATCGGCC
AAGGCAACCC AGGAAGCCAT GACGACCCCG ATTCAATCCG AGGCAACCGC CGCAATCCCA
GCACAACAAG GCTTCCAGCC AGTCTCCGAA GATGGCATCC ACACCGAATC TCTCGATCAC
CACTAA
|
|---|
| Protein sequence | MPRLPYLTML LSLALAAGHA FAGPEEDQRA RNALRVLTEL QKIPEQTIPD KLLEEARAIV
IIPDTLKVGF IIGGRRGQGL MSIKTPQNTW SQPVFVKLTG GSIGLQAGVQ SSDVVLVFRN
DRNLDNIVNG KFTLGADASV AAGPVGRNAL AATDSELKAE IYSWSTARGL FAGIALDGAA
LQIDDNANLD VYGKGTTPRM IFEGRTAEPP SSDVIAFRDR LEEVTYTARN NRNKTTKQSG
WNQHTSTPRP GTTVRVTPSA KATQEAMTTP IQSEATAAIP AQQGFQPVSE DGIHTESLDH
H
|
|---|
| |