Gene Xfasm12_1731 details

Gene Information

• Locus tag: Xfasm12_1731
• ID: 6120968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 1799587
• End bp: 1800105
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641649708
• Product: 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
• Protein accession: YP_001776261
• Protein GI: 170730828
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGGC AACATGCGTA TTCACGCGAA GAACTGCTGG CAACCGCGCG TGGCGAACTC 
TTCAGTCACA GCAACGCCCG CCTGCCGAAT GATCCAATGC TGATGTTTGA CAGAATCACC 
GGAATTTATG CAGACGGCGG CTCACACGGT AAGGGTATCG TCAATGCGGA ACTTGATATT 
CGGCCAGACC TGTGGTTCTT CGGTTGTCAT TTCCTCGGTG ACCCAGTGAT GCCAGGCTGT 
CTCGGCCTGG ACGCCATGTG GCAACTCACC GGTTTTTTTC TAACATGGAG CGGCGCAACC 
CCCGGATACG GTCGTGCATT GGGCTGCGGC GAAGTCAAGT TCACAGGTCA AGTACTGCCA 
AACGCAAAAT TGGTGCGTTA CGAAGTAGAG ATGACCAAAA TCATCAACCG CACACTGGTC 
ATTGGTCAGG CTAATGCCCG GATGTTGGTA GATAATCGTG AGATCTATTT CGCCAAAGAC 
CTACGCGTAG GTATGTTCAA CAACACAGAA TCTTTTTAG 

 

Protein sequence

MSRQHAYSRE ELLATARGEL FSHSNARLPN DPMLMFDRIT GIYADGGSHG KGIVNAELDI 
RPDLWFFGCH FLGDPVMPGC LGLDAMWQLT GFFLTWSGAT PGYGRALGCG EVKFTGQVLP 
NAKLVRYEVE MTKIINRTLV IGQANARMLV DNREIYFAKD LRVGMFNNTE SF