Gene Xfasm12_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1714 
Symbol 
ID6121673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1784784 
End bp1785113 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content47% 
IMG OID641649692 
ProductDNA transport competence protein 
Protein accessionYP_001776245 
Protein GI170730812 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0133378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTT TCGCTATGAG ATTGAAGTCT TTGTTGTTGT TGTTTGTCCT TGCTTTCACG 
GTACATGCGG CTAACAAGGT CGATATCAAC ACTGCTTCAG CGGAAGAAAT GGATAAGGTA
TTGGTGAATA TTGGCCCCTC TAAGGCCTCG GCCATCGTCA AGTACCGTGA GGAAAATGGT
CCCTTCAAAA GTGTTGAGGA ATTGGCGCTA GTCAAAGGAA TCGGAATGAA GACGGTTGAA
CGGAATCGTG ACCTGATTGA AATTGGCACC AGGATGGCAC CTGCTAAACC TGCCAAGGGA
ACGGAGCTGA AGTCGGTGGG AAAGCGGTAA
 
Protein sequence
MKSFAMRLKS LLLLFVLAFT VHAANKVDIN TASAEEMDKV LVNIGPSKAS AIVKYREENG 
PFKSVEELAL VKGIGMKTVE RNRDLIEIGT RMAPAKPAKG TELKSVGKR