Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1714 |
Symbol | |
ID | 6121673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1784784 |
End bp | 1785113 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641649692 |
Product | DNA transport competence protein |
Protein accession | YP_001776245 |
Protein GI | 170730812 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0133378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTT TCGCTATGAG ATTGAAGTCT TTGTTGTTGT TGTTTGTCCT TGCTTTCACG GTACATGCGG CTAACAAGGT CGATATCAAC ACTGCTTCAG CGGAAGAAAT GGATAAGGTA TTGGTGAATA TTGGCCCCTC TAAGGCCTCG GCCATCGTCA AGTACCGTGA GGAAAATGGT CCCTTCAAAA GTGTTGAGGA ATTGGCGCTA GTCAAAGGAA TCGGAATGAA GACGGTTGAA CGGAATCGTG ACCTGATTGA AATTGGCACC AGGATGGCAC CTGCTAAACC TGCCAAGGGA ACGGAGCTGA AGTCGGTGGG AAAGCGGTAA
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Protein sequence | MKSFAMRLKS LLLLFVLAFT VHAANKVDIN TASAEEMDKV LVNIGPSKAS AIVKYREENG PFKSVEELAL VKGIGMKTVE RNRDLIEIGT RMAPAKPAKG TELKSVGKR
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