Gene Xfasm12_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1709 
Symbol 
ID6121668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp1780260 
End bp1780952 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content56% 
IMG OID641649687 
Productputative hydroxylase 
Protein accessionYP_001776240 
Protein GI170730807 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.822877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTAC ACATCCCCAC CATCCTCAGT CGCACCCAAG CCACCTCAAT GCAGGAACGC 
TTAGCGGCAG CCAATTGGAC CGACGGACGC GAGACCGTCG GTCCCCAAGG GGCGCAGGTT 
AAACATAACC TACAGCTACC GGAAACATCA CCACTACGCC AAGAACTCGG GCACGAGATC 
CTTGATGCAC TGGCACGCAG CCCACTGTAC TTTGCTGCAA CATTACCGCT ACGCACACTG 
CCACCACGTT TCAACCGCTA CCAAGAAAAC CACCAATACG GATTTCACGT TGACGGCGCA 
GTGATGTCCC TTCCGGTCGC CCCCGACCAT ACTCCAGCCA GCCTACGCAG CGACATCTCC 
TGCACCTTAT TTCTCAACGA CCCGGACGAA TACGAGGGCG GTGAACTGAT CATCGCTGAT 
ACCTACGGCG AGCATGAAAT CAAATTACCA GCCGGGGACC TTATCATTTA CCCATCCACC 
AGCTTGCACC GGGTAGCACC GGTCACCCGC GGCATGCGCA TCGCCTCTTT TTTTTGGGTG 
CAAAGCCTGG TGCGTCAAGC CACACACCGC CATCAATTAC TTGAGCTGGA CACAGCGATA 
CAATCACTGA CTGCCTCCAA CACCGACCAC AACACGATCC TGCGACTCAC CAACATCTAT 
CACAACCTAC TGCGGGAATG GTCGGAAACC TGA
 
Protein sequence
MLLHIPTILS RTQATSMQER LAAANWTDGR ETVGPQGAQV KHNLQLPETS PLRQELGHEI 
LDALARSPLY FAATLPLRTL PPRFNRYQEN HQYGFHVDGA VMSLPVAPDH TPASLRSDIS 
CTLFLNDPDE YEGGELIIAD TYGEHEIKLP AGDLIIYPST SLHRVAPVTR GMRIASFFWV 
QSLVRQATHR HQLLELDTAI QSLTASNTDH NTILRLTNIY HNLLREWSET