| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1701 |
|---|
| Symbol | |
|---|
| ID | 6121660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1768462 |
|---|
| End bp | 1769502 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641649679 |
|---|
| Product | GDP-mannose 4,6 dehydratase |
|---|
| Protein accession | YP_001776232 |
|---|
| Protein GI | 170730799 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.286403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAATA AAAGCGCGGT CATTACGGGT ATTACAGGAC AGGATGGTGC TTATTTAGCG
CAGTTGCTCC TCGAAATGGG TTATGTGGTT TATGGTACGT ATCGTCGTTC TAGCTCATTG
AACTTCTGGC GTATTAATGA ACTTGGGATT GCACAGCATC CCAATTTACA TCTGGTCGAA
TATGATTTGA CCGATCTCTC TTCGAGTGTG CGACTGCTCG AATTGGCCGC TCCTAAAGAG
GTCTATAATC TTGCCGCACA GAGCTTTGTT GGCGTCTCTT TTGACCAGCC ATTGACCACG
ACCGATATTA CCGGAGTGGG TGCGGTCAAC CTGTTGGAAG CCATTCGGAT TGTTAATCCT
AAGATTCGCT TCTATCAGGC ATCGACTTCT GAGATGTTTG GAAAAGTCCA GCAGACTCCG
CAGATTGAGG AAACGCCTTT CTATCCGCGT AGCCCATACG GTATTGCCAA GTTGTATGCT
CACTGGATGA CGGTTAATTA TCGTGAGTCG TACGGTATCT TTGCTGCTAG TGGTATTTTG
TTTAATCACG AATCGCCGTT GCGAGCGCGT GATTTTGTCA CTCGTAAAAT CACTCATGCG
ATTGCCATGA TTAAATTAGG GAAGCTAGAC GTATTAGAGC TTGGTAATTT GGATGCCAAA
CGTGATTGGG GTTTTGCGAA GGAATATGTT GAGGGAATGT GGCGTATGCT TCAGGCTGAT
GAGCCAGATA CTTTCGTGCT GGCAACCAAC CGAACTGAAA CTGTGCGTGA TTTCGTCAGC
TTGGCTGCCA GTGCCGTTGA TATCCAGTTG GAGTGGAAGG GACAAGCCGA ACGGGAATGT
GGTGTTGATG TTGCATCGGG AAAAACTTTA GTCACAATCA ATCCTAAGTT TTATCGACCG
GCTGAGGTGG ATTTGTTGAT CGGTAATCCG GCCAAAGCTA GAACGAAGCT GGGTTGGGAA
CCAAAGACCA CACTTGAGGA GCTTTGTCAC ATGATGATGG AAGCAGATGT GCGCCGCAGC
GAACGCGATT TCCCCTTCTA A
|
|---|
| Protein sequence | MCNKSAVITG ITGQDGAYLA QLLLEMGYVV YGTYRRSSSL NFWRINELGI AQHPNLHLVE
YDLTDLSSSV RLLELAAPKE VYNLAAQSFV GVSFDQPLTT TDITGVGAVN LLEAIRIVNP
KIRFYQASTS EMFGKVQQTP QIEETPFYPR SPYGIAKLYA HWMTVNYRES YGIFAASGIL
FNHESPLRAR DFVTRKITHA IAMIKLGKLD VLELGNLDAK RDWGFAKEYV EGMWRMLQAD
EPDTFVLATN RTETVRDFVS LAASAVDIQL EWKGQAEREC GVDVASGKTL VTINPKFYRP
AEVDLLIGNP AKARTKLGWE PKTTLEELCH MMMEADVRRS ERDFPF
|
|---|
| |