| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1689 |
|---|
| Symbol | |
|---|
| ID | 6121649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1756951 |
|---|
| End bp | 1759227 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641649670 |
|---|
| Product | C-type cytochrome biogenesis protein (copper tolerance) |
|---|
| Protein accession | YP_001776223 |
|---|
| Protein GI | 170730790 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.2628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCT TGCATCGTTT AGCCACACTA TGTGTATTGG CACTGATTTC TTTTCCTGTA
GTCGCCGTCA GCGAAACGGA CCTACTTCCG GTGGAAAAGG CTTTTGTGGT CGGGGTGAAA
GCTCTTGATC GCCATCATGT GTTGGTGCAT TGGAAGATCG CCGAGGGTTA TTACCTTTAC
CGACATAGGA TTGCGGTGCG GGTCTTGAAT GATGGTGTGC TCAAAAGCGA TTCCAAGCTG
AATTTGCCAA ATGGCTACAA GAAGAATGAT TCGTATTTGG GGGACGTTGA AATTTACCGT
GGGAGTCTGA CCGCGGTGCG CAGCGTATTG CCTGTGAAAG GTGTGCATAA GCTGACGTTG
CAAGTGAACT ACCAGGGATG TGCGGATGCC GGTGTGTGTT ACCCACCGCA GGTACGCACG
TTGCATGTTG CGTTGCCGAC TGATGGTAAT GATTTGGATA GGGGAGCTGC GGTTGATAGG
CAGGATAGGG GGAGCGCTGT TGACGCGCGA CCATTGCTCA GTGAGATTGT TCCTGGAGTC
CGTGCATTGC CGCTTCCAGC CGAGCAGGCG TTCGGTTTTG AGGCGATCGT TGGTGATGGT
AATCATCTGT TGCTGCGTTT TACCCCGGCC AAGGGGTACT ACCTGTACCG TGACCGCACT
TCACTGGCCT TGGAAGGTGA TAAGACTGTT CATACGGGTG TGGCGTATTG GCCGCAGGGC
AGTAAGTATC ACGATGAGCA TTTTGGTGAT GTGGTCGTTT ACTTCAATCA AATTGAAGTG
ATGCTGCCGC TACAGCGTGA TTATTCAGGG CCTATCGCTA ATGCGACTCT GGTAGCGACT
TTCCAGGGGT GCCAAATTGA CGGCATTTGC TATCCGCCGA TGACTCGTCG GGTGCGTTTG
TCTTTGCCTT CTGGAAAGGT CTCCTCGCCG AATCGCGCTA ATGCTATACC GTTGATGGGT
AACCATGCCT CTCTCCAGAA CCCATTGCGT TCGCCAGGTA GCAACGTCCC GTCGGCCACG
GCCAGTCAGT CGGCCGTTTC GGTTGACAGT GCTTTGGAGA ATCATCCGTC GTACAGTGCG
AGCAAGTTTT TCATGGCGTT GTCTCTGGCA TTAGTCGGTG GTTTGCTATT GAATTTGTTG
CCGTGCGTGT TGCCGGTGTT ATCGCTGAAG GTATTAGCGT TGGCTAAAAG CGGTGAGAGC
CGTGCTTGTG CGCGTCGCCA TGCCATTTGG TACACAGCCG GCGTATTGCT CTCGTTTGGC
GTCATCGGCG GTATCGCGAT TATGGCGAAG ATACTATGGG GCTTTCAGCT TCAGCAGCCT
GGCTTTGTGG GCGTATTGGT TTACTTGATG TTTGCCGTTG GCCTGAGTTT GTCAGGGGTC
TTTACCATGA GCAGCACCAA GTTTGGTGCG ATAGGTCAGT CATTGATGGC GCGCAGTGGG
CCATTAGGCG ATTTCTTCGC TGGGGTGTTG GCTTGTGTGG TGTCCAGTGC CTGCATTGGT
CCATTCATGG GCCCTGCGTT GGTCTACGCG TTCACCGCGC CGCCGTTGTT GGCAATGTTG
GTATTCCTTA CGCTTGGCTT TGGTTTGGCA TTGCCGTTTC TGTTGCTTGG CTTTGTGCCA
TCGTTGACAC GTCGTTTGCC GACGCCGGGT CCATGGATGC AGACACTGAA ATACGTTCTG
GCATTGCCAA TGTATTTGAC TGCAATCTGG TTATTGTGGG TTCTGGGCAA ACAGCGCGGT
GTGGATGCAC AGTCGTTGCT GTTGGTTGGC TTGGTCATGT TGGCAATGGG ATTGTGTTGG
TTCGAGCGCA GCCGTTGGAA TGCTGATCGC TGGGGGCTGG TGCTCTCCAG TGTATTGTTA
TTGTTGACCT TGTTGCCGCT TTGGGGGGTG ACGCAACTGA AGATACCGCA TTCGATCGCG
CAGAATGTCA GTAGCGATGA AGTGGCTTAC TCGCCGCTGC TTCTGGATCG TTTGCGTGCT
GATAACCGTG TTGTTTTTGT CAATGTGACT GCGGATTGGT GCGTGACCTG CAAGGCGAAT
GAACGCAATG TGTTGTCCAG TGATGCTTTT CACGATGTGA TGCATCGGAT TGATGCTGTG
TATATGAAGG GTGACTGGAC TAATGGAGAT GCTCAGATTA GTGCGTTTCT AAGTCAGCAT
CAGGCAGTAG GTGTACCGCT GTATGTGGTT TATGGGCCAG GTGCACCGCC CAACATTCTT
CCCAATGTGT TGACTAAGGA TGTTGTGGAG GATGCTTTGT TGCGCGCTGC ACGTTGA
|
|---|
| Protein sequence | MTFLHRLATL CVLALISFPV VAVSETDLLP VEKAFVVGVK ALDRHHVLVH WKIAEGYYLY
RHRIAVRVLN DGVLKSDSKL NLPNGYKKND SYLGDVEIYR GSLTAVRSVL PVKGVHKLTL
QVNYQGCADA GVCYPPQVRT LHVALPTDGN DLDRGAAVDR QDRGSAVDAR PLLSEIVPGV
RALPLPAEQA FGFEAIVGDG NHLLLRFTPA KGYYLYRDRT SLALEGDKTV HTGVAYWPQG
SKYHDEHFGD VVVYFNQIEV MLPLQRDYSG PIANATLVAT FQGCQIDGIC YPPMTRRVRL
SLPSGKVSSP NRANAIPLMG NHASLQNPLR SPGSNVPSAT ASQSAVSVDS ALENHPSYSA
SKFFMALSLA LVGGLLLNLL PCVLPVLSLK VLALAKSGES RACARRHAIW YTAGVLLSFG
VIGGIAIMAK ILWGFQLQQP GFVGVLVYLM FAVGLSLSGV FTMSSTKFGA IGQSLMARSG
PLGDFFAGVL ACVVSSACIG PFMGPALVYA FTAPPLLAML VFLTLGFGLA LPFLLLGFVP
SLTRRLPTPG PWMQTLKYVL ALPMYLTAIW LLWVLGKQRG VDAQSLLLVG LVMLAMGLCW
FERSRWNADR WGLVLSSVLL LLTLLPLWGV TQLKIPHSIA QNVSSDEVAY SPLLLDRLRA
DNRVVFVNVT ADWCVTCKAN ERNVLSSDAF HDVMHRIDAV YMKGDWTNGD AQISAFLSQH
QAVGVPLYVV YGPGAPPNIL PNVLTKDVVE DALLRAAR
|
|---|
| |