Gene Xfasm12_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1659 
Symbol 
ID6121618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp1734163 
End bp1734792 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content56% 
IMG OID641649643 
Producthypothetical protein 
Protein accessionYP_001776197 
Protein GI170730764 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.255203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGCA TGGCTTGTCG ACGGGCGGTG CGTACTGGGG CGCACTGTGA TGAGGGTGGA 
CACGTAAAGG CGTTCGATTA TCCTGACTCC ATGAATAACA AGCCAGTTCC CATTGTTTTG 
CGGAGGACGT CCATTGGTTC GATCCTCTTC ATCCTCCCTG CAATGCTGAT TGGTTGCAGT 
CGCGTGCCGG TCAAAACACA GCCCAAGCCC GCTTCAGTCA ACGTGTGGTC CCTCACAACC 
CCAGCCAATC CAGAGGCAGC CAATGAGGTC GTGATGCGTG CCTTGAGCTT GGTTGGCACT 
CCGTACCGCT TCGGTGGCAA CACCCCTGAG AGTGGATTCG ACTGCAGCGG TTTAGTCAGC 
TACGTCTACC GGGATGCACT CGACCTGCGT CTACCGCGCA CTTCCTACGA GCTGGCCGCA 
GTGCAGGGTC CCAAGATTGA CGCTGAACAA CTGACCACTG GTGATTTGGT GTTCTTTGGG 
AGTGCCCGCA GTGTCACTCA CGTGGGCATC TATCTCAGTG AAGGTCGCTT CGTACATGCC 
CCCAGCAGTG GTGGCACCGT GCGTTTGGAT CGGCTTGATA CCCCTTACTG GAGGGATCAT 
TACACTGGCG CAAAACGTGT TTTACGCTGA
 
Protein sequence
MLSMACRRAV RTGAHCDEGG HVKAFDYPDS MNNKPVPIVL RRTSIGSILF ILPAMLIGCS 
RVPVKTQPKP ASVNVWSLTT PANPEAANEV VMRALSLVGT PYRFGGNTPE SGFDCSGLVS 
YVYRDALDLR LPRTSYELAA VQGPKIDAEQ LTTGDLVFFG SARSVTHVGI YLSEGRFVHA 
PSSGGTVRLD RLDTPYWRDH YTGAKRVLR