Gene Xfasm12_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1658 
Symbol 
ID6121617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1733245 
End bp1734108 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content53% 
IMG OID641649642 
Producthypothetical protein 
Protein accessionYP_001776196 
Protein GI170730763 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.110646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGCTG GACCGGGGCA TCATCCCCCC TTACTTTCGA AACACTGTGA TGCTCGCGTG 
AAGATAAAAG ACGAACAGTT TAAATCTAAC CCCGCTGTCC ATCCATTTCA GAAGCCGCTT
TATCTACTGT GCTCAACAAC GCTGTTATTG GGTCCTATAT CGGCTCTGGC GCAGGATATG
CCGCAACTCC CGGCTGCTGT TGCCCTTCAT GCCACTCCCG AGGGTGCTCA GGGTGAGTCT
GCTACTGCTA CTGCTACTGT TGCTGTTGCT GCTAATACTA CTGCTGTTGC TGCTACTCCC
CCTCGCAACC GTACTGATGC GGCTACCACT GTTGCTTTGG CCGCATTGCT GCCGCATCTG
GCCAACAACG ATACGATCCC GCTGATGGAT CGTTCTGCCC TGTTTGCTGG TGACATGAAT
CGTGCGTTGA CTGGTTACGA TGTATCCCAG AGCACCCTTG CAGCGGCCGA GAAAGCAGTC
ACCGATAAAA AGACCCAAGT AGTCCTCAGG CGTGCAATGA ACCTGCTTGG TACCCCCTAT
CGCTGGGGAG GCGCTCGTCC TGGAGGTTTT GATTGCAGTG GCTTAGTCAA CTATGTGTTC
CGTACTGCGC TTGGGATCCA GTTACCGCGC GTCTCCCGTG ATATGGCGCG TCACTCTGGC
GGTGAGTTGA TTAAGGATCG TAAGGAAGTA CGCACCGGTG ACTTGGTGTT CTTCGGTAAA
GCTGGTCGTA TTACCCATGT AGGGATTGTT CTGGATAAAG GGTTATTTCT GCACGCTCCC
AGAACTGGTA AAGACGTTCG TATGGATTCC TTCTCCAGTG GCTACTGGAG CCATAAATTT
ATCCAGGCGC GTCGTGTCCT TTGA
 
Protein sequence
MRAGPGHHPP LLSKHCDARV KIKDEQFKSN PAVHPFQKPL YLLCSTTLLL GPISALAQDM 
PQLPAAVALH ATPEGAQGES ATATATVAVA ANTTAVAATP PRNRTDAATT VALAALLPHL
ANNDTIPLMD RSALFAGDMN RALTGYDVSQ STLAAAEKAV TDKKTQVVLR RAMNLLGTPY
RWGGARPGGF DCSGLVNYVF RTALGIQLPR VSRDMARHSG GELIKDRKEV RTGDLVFFGK
AGRITHVGIV LDKGLFLHAP RTGKDVRMDS FSSGYWSHKF IQARRVL