| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1648 |
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| Symbol | |
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| ID | 6121607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1722400 |
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| End bp | 1725222 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641649633 |
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| Product | hemolysin-type calcium binding protein |
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| Protein accession | YP_001776187 |
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| Protein GI | 170730754 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA ATACGGAAGA TACAGGTAAA GCAACATCTC ATCAGATTGA TTACAGCACT
TTCAATCAGT TGAGCGCCTC ATATACCGCT GGGGTTTTTG CCTTTACGCA AGAATATGAA
AGGCACTATT CCATACTGAT TCGGAATATG GACCAGCAAG CAGCCACCAT TCAAGCTCTG
CAGGCTGCAC ATCAACGTCA AGCTGATTTA TATTGGAGGT ATTCTAATAG AGCCGATCTT
GCTGGAAATG CTACCTTGAG GGATATGTAT GCCGAGGTGG CTCGGGGAGC GGCTTTCCGT
GTGCATGATT TATCCGTGGC GCAAGATGGG GCCACACAGG TGCTGAATTC ATATTATTCT
CAGGCGCAAT CACGATTTGC GTCATTAATC AAAACTAATC CAGCACTGCG ATTTGTTGGG
AAATATGGCG GACCTATAGC TGATGTGGCG AGTGTCGGTG TTGCGATTAA ATTTGGCGGT
CCCGGTGATA TCGCAAAGTC GATCGGTATG ATTGCTATCG GATTAACTGC TGGGTATTTA
TTCGGGGCTT TGATAGGAGT GGCTGGACTT GGTGCTGCGG TTGCAGCTGG TTTAGTTGCT
GCTGGTGTAG CATACATTAG CGATCAATAC ATACCTCAGG AATGGTGGGA AAGCATCGAG
AATAAAAGCA AAGAAACATT CAAAGATCTC TTTGATCAAA TCCGCCGTTT CACCCCGCGT
CGCGACCCAC TAGTCCTGGA CCTGGATGGC GACGGCATCG AAACCGTGGC CGCGGGTAAA
CATATCCTGT TTGATCACGA CGGCGACGGC ATTAAACACG CCAGCGGCTG GGTGAAGCCC
GATGACGGCT TTTTGGTGTT GGACCGCAAC GGCAACGGCC GCATTGATGA CGGGAGTGAA
CTGTTCGGTG CCGATACCAT CTTAGCCAAC GGTCACAAAG CCACCTCCGG TTTTGAGGCA
CTGCGTGATC TAGATAGTAA CGGTGATGGC CTCTTCGATG CCGCCGATGC CCGCTTTGCG
GACGTGCGCG TCTGGCGCGA TCTTAATCAG GATGGCCAAT CCCAGGCCAA CGAGCTGTTC
ACCCTCTCCA GCCTAGGCAT TGCCTCCATC ACGCTGACCC CCACCAACAC AGAGGATGTG
GACTTAGGCA ACGGTAACCT GATTGACAAC CGCGGCACCT ACACCCGTAC CGATGGCCGT
ACCGGCGTGG TCGGCGACCT GCAATTAGGT CTTGAGCACT TCTACCGCGA TTACAGCGGC
GCTAAAGAGC AGGTGACCGT CACGGATGCC GCTGCGGCCT TGCCACATTT GACAGGCAGC
GGTGCGGTGC GTGATCTGAG AGAGGCCGCC AGCCTATCGC CCGCCTTATT GGCGGCTGTT
CAGGCGTTGA CACCCGGCAC TACCCGCGAC ACCATGCGCA TCGCGTTGGA TCCGCTTGTC
GCCCTCTGGG CCGGCACTTC GACCATGCCC AGCACCGAGG AGCGCTTGGA GACTTCCGGA
GCTGTCACCC GCACCGTCTA TTACCATGGT GTTGTGCCCT ATACCGTGAC TGCACAGGGG
AAGGAGGCCG TTCTGGCCTG GACCAAAGAG CAGCATGCCC AACTCGGGCC GATCATCGCC
ATTCTGGAGA AATTCAACGG CTCCAGCTTG GTCAGCGAAC GCAATGGCCA GGTGTCCACA
GGGGGCGAAA CCTTCACCTG GAACCGTGTC ATCCATCCTG ACGGACACAG CGAAGACGTG
ATGAGCATCC TGCTCCAGCC AGAGCAGATC AATAGCTTGA TGAGCGCCTA CGCCAGCTTG
AAAGAATCTG CCTATGCCGG ACTGGTTCTC GGCACCCGGT TGAGTGATTA CCTGTCTGGA
CTCACCCTGA CCTACAGCAA TGATGCCTTT GGATGGGATG CGTCCGCCCT AGAGGCCAAG
CTAGATCACA CCTGGCAGCG CAACAAAACC CAGGCGCTTC AGGATGTCAT GGACCTGTAC
CGCTATGGCA GTAACGCCGT GGCGGCTAGC GGCTGGAAAC CCTTCGATGC CTTACGCCAC
ATGATCGACC GGGCCGCAGC AACACCTGAT GGGAGGCAAG CGCTGGCGGC TGCGGAGATC
ACCCTAGTTT CTGGAAGTGC CGAAGGCAGT GCCGCCGCGG ACCTGATGTT TGGCGATACA
GGGGCTAATA TTCTGCGAGG CGGCGCGGGC GATGATGTGC TCTCCGGCGG TGATGGAGAT
GACACGCTGT ACGGTGGCGA TGGCAACGAC ATCCTCCACG GCGATGCGGG TAACGACACC
CTCTACGGTG GCGGCGGCAA TGATCTGCTG CTGGGCGGTG CTGGCGATGA CGTCCTAGAC
GGCGGCGAAG GCAGCAACCG CCTAGACGGC GGCGCCGGTA ACGATGTACT GAAAGTGTCG
TATTGGTCCG CAGATAACGT GCTGAACGGC GGCACCGGTG ATGACACGTT GTATGGCAGC
GGTTACGCGG ACACATACAT ATTTAATAAG GGAGACGGTC ACGACACGAT CATTGAGCAA
GGCGGTACTG ACAAGCTGGT GTTTGGTGAG GGGCTGCATC AGAAAGACGC CCGCTTTACG
AAATCAGGAA ACGATCTGTC TATTCTCTTG AATAGTGGGG TGGATCAGGT GACTGTGGCG
GGTTGGTTCA GTGCGGCGGC GCATCAGGTG GAATCGTTGG TGTTCCAGGA TGGGACGGTG
CTGTCCGGTG AGGTGGAGCG TTTGATTGCG GCGATGGCGC TGTCCCCTGC GGTGACGACG
ATGCAAGCCA GTGTGCGTGA TACCAAGGAG TTACATAGGC TGGTGGCCAG TTCGATTGTC
TAA
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| Protein sequence | MSNNTEDTGK ATSHQIDYST FNQLSASYTA GVFAFTQEYE RHYSILIRNM DQQAATIQAL
QAAHQRQADL YWRYSNRADL AGNATLRDMY AEVARGAAFR VHDLSVAQDG ATQVLNSYYS
QAQSRFASLI KTNPALRFVG KYGGPIADVA SVGVAIKFGG PGDIAKSIGM IAIGLTAGYL
FGALIGVAGL GAAVAAGLVA AGVAYISDQY IPQEWWESIE NKSKETFKDL FDQIRRFTPR
RDPLVLDLDG DGIETVAAGK HILFDHDGDG IKHASGWVKP DDGFLVLDRN GNGRIDDGSE
LFGADTILAN GHKATSGFEA LRDLDSNGDG LFDAADARFA DVRVWRDLNQ DGQSQANELF
TLSSLGIASI TLTPTNTEDV DLGNGNLIDN RGTYTRTDGR TGVVGDLQLG LEHFYRDYSG
AKEQVTVTDA AAALPHLTGS GAVRDLREAA SLSPALLAAV QALTPGTTRD TMRIALDPLV
ALWAGTSTMP STEERLETSG AVTRTVYYHG VVPYTVTAQG KEAVLAWTKE QHAQLGPIIA
ILEKFNGSSL VSERNGQVST GGETFTWNRV IHPDGHSEDV MSILLQPEQI NSLMSAYASL
KESAYAGLVL GTRLSDYLSG LTLTYSNDAF GWDASALEAK LDHTWQRNKT QALQDVMDLY
RYGSNAVAAS GWKPFDALRH MIDRAAATPD GRQALAAAEI TLVSGSAEGS AAADLMFGDT
GANILRGGAG DDVLSGGDGD DTLYGGDGND ILHGDAGNDT LYGGGGNDLL LGGAGDDVLD
GGEGSNRLDG GAGNDVLKVS YWSADNVLNG GTGDDTLYGS GYADTYIFNK GDGHDTIIEQ
GGTDKLVFGE GLHQKDARFT KSGNDLSILL NSGVDQVTVA GWFSAAAHQV ESLVFQDGTV
LSGEVERLIA AMALSPAVTT MQASVRDTKE LHRLVASSIV
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