| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1622 |
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| Symbol | |
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| ID | 6119450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1694750 |
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| End bp | 1696690 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641649606 |
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| Product | c-type cytochrome biogenesis membrane protein |
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| Protein accession | YP_001776161 |
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| Protein GI | 170730728 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCTG AGTTTGGCCA GATCCTCCTG ATCCTCGCCC TGCTGACAGC ACTGCTGCAG
GGACTGCTTC CCCTGATTGG CGCCCAGCGC CGCCGCACTG CTTGGATGGC CGTTGCACGC
CCAGCCGCCT ATGTGCAACT GAGCCTGCTC GCTAGCGCAT TCGCACTGCT CACCTATGCC
TTCCTCGGCA ACGACTTCTC CGTCCAGTAC GTCGCCGAAA ATTCCCATTC ACTGCTACCC
ACCCTCTACC GCTCTACCGC CGTGTGGGGT GCCCACGAAG GATCCCTCCT ACTCTGGGTA
TTACTCCTGG CAGGATGGAC CGCCAACGTC GCCTTACGTT CCCACACCCT TCCAGCCACC
CTGAGCGCAC GCATCCTTGG CGTCCTGGGC CTGATTGCAC TCGGCTTCCT CGCACTGATC
CTCTTCACCT CCAACCCATT CGCACGTCTC CTGCCTGCCG CCCCAGAAGG GAACGACCTC
AACCCGTTGC TGCAAGATCC TGGGATGATT CTGCATCCCC CCCTGTTATA TGCCGGCTAC
ATCGGTTTGG CAGTGCCATT CGCCTTTGCC GTCGCGGTCC TGCTGGAAGG ACGGATAGAG
CCAGCCTGGC TACGCTGGAG CCGACCTTGG ACCAACATCG CCTGGGCACT GCTGACCTTG
GGCATTGCCC TGGGCAGCTG GTGGGCCTAT TACGAACTCG GCTGGGGCGG CTGGTGGTTC
TGGGACCCAG TGGAAAACGC CAGCTTCATG CCTTGGCTCA TCGGTGTCGC ACTGATTCAT
TCCCAAGCGA TCACCGACAA ACGCGGCAGC TTCACCCACT GGACACTCTT GCTCGCAATC
ACCGCCTTTG CACTAGCACT GCTTGGCACA TTCCTCGTCC GCTCAAGCGT ACTGACCTCA
GTCCATGCCT TTGCTGCTGA TCCGGTACGC GGCGCGTTTA TTCTGCTGCT CATCTTCACG
TTGATTGGCG GCGCACTGCT GCTGTATGCA CGGCGTGCAC CGCAACTCAC CCCCGTCACA
ATGGACATGC AACAACGCTT TACACCCGTC TCACGCGAAA CCCTATTACT GCTCAACAAC
CTATTGCTGA CCTGCGCCTG TGCGATGGTA CTGCTAGGCA CCCTATATCC CCTGCTGGCC
GATGCACTGG CACTGGGTCA ACTTTCAGTC GGCCCACCCT ACTTCGGCCC CCTATTCACC
CTGCTGATGA CACCACTAAT CGTCTTACTG CCATTGGGTC CATTCACCCG ATGGCAACGC
GAACACCCCT CAACACCCCT CGTATTGCTG GCCCCTTGGG CCGCACTGAG CCTGGCTGTC
GCCGCACTGG CTGGCATCAC CACACCACAA CACCATTGGA AAACCATGCT CAGCGTGGCC
GCGGCAGCAT GGGTACTCCT AGGAACCCTC CGCTTCCTCT GGTGGCACTG GCGCACCACC
GGATCCCGTC CCACCCCCAG CACCCTGGGC ATGGTCCTGG CACACGCCGG AATTGGCGTC
TTCCTCACTG GTGCGCTGTT AGTTGAAACA CTCAGCCTAC AACGTGAAAT TGCACTCACC
CCGGGCCAGA CACTCACCCT TGGCCCCATC ACCCTACACT TTGATGCCCT CCTCGAACAC
CACGGCCCCA ACTACGTGGC TGATCGCGCC CAATTCAGCC TATTACGCAA CACGCATCCC
CTGGGCACCC TGACGACAGA AAAACGCCGC TATGTCAGCG GCGGCCAAGT CACCACCGAA
GTTGGCATCC ATCCTGGAGC GCTCGGTGAC ATTTACGTCG CCTTAGGAGA ATCGCTCGGC
AATGGGTCAT GGGCAATTCA GGCACACTAC AAACCATTCG TCCGTTGGAT CTGGCTGGGC
GCAGCACTGA TGGCCCTGGG TGGGCTGATC GCTGCTGCTG ATCGCCGGTT CCGCCACCAC
CCGGAGTCAT CGCATGTCTG A
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| Protein sequence | MLPEFGQILL ILALLTALLQ GLLPLIGAQR RRTAWMAVAR PAAYVQLSLL ASAFALLTYA
FLGNDFSVQY VAENSHSLLP TLYRSTAVWG AHEGSLLLWV LLLAGWTANV ALRSHTLPAT
LSARILGVLG LIALGFLALI LFTSNPFARL LPAAPEGNDL NPLLQDPGMI LHPPLLYAGY
IGLAVPFAFA VAVLLEGRIE PAWLRWSRPW TNIAWALLTL GIALGSWWAY YELGWGGWWF
WDPVENASFM PWLIGVALIH SQAITDKRGS FTHWTLLLAI TAFALALLGT FLVRSSVLTS
VHAFAADPVR GAFILLLIFT LIGGALLLYA RRAPQLTPVT MDMQQRFTPV SRETLLLLNN
LLLTCACAMV LLGTLYPLLA DALALGQLSV GPPYFGPLFT LLMTPLIVLL PLGPFTRWQR
EHPSTPLVLL APWAALSLAV AALAGITTPQ HHWKTMLSVA AAAWVLLGTL RFLWWHWRTT
GSRPTPSTLG MVLAHAGIGV FLTGALLVET LSLQREIALT PGQTLTLGPI TLHFDALLEH
HGPNYVADRA QFSLLRNTHP LGTLTTEKRR YVSGGQVTTE VGIHPGALGD IYVALGESLG
NGSWAIQAHY KPFVRWIWLG AALMALGGLI AAADRRFRHH PESSHV
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