| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1613 |
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| Symbol | |
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| ID | 6119441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1687294 |
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| End bp | 1688724 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641649597 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001776152 |
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| Protein GI | 170730719 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.230616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA CCCCAAAACC ACCATCAAAC ACACTTTCAC TCAAACGCGA GACAGCCACA
GAAGCACCCA AACTGGAAGA GCGCCTGCAT AAAGTGCTTG CCCAAGCGGG TCTAGGTTCC
CGCCGTGCCC TGGAACAACG CATCTCCAAC GGACTCATCA AAGTCAATGG AGACATTGCA
CAGCTCGGCA TGTCCGTTAA AAGTGGCGAC AAAATCGAAC TGGACGGCCG CAGCTTCGTC
GCCAGCGCCC TCACTGAACC GGCGCGCGTA CTGATCTACA ACAAACCAGA AGGCGAAGTG
ACCACACGCG AAGACCCAGA GGGTCGCCCC ACTGTGTTCG AAACACTCCC CGTCCTCAAA
GGTGCACGTT GGATCGCCAT CGGCCGCCTG GATATCAACA CCACTGGCCT ATTACTGCTC
ACCACAGACG GCGAACTTGC CAATGCAATG ATGCACCCCT CATCGGAAAT AGAACGCGAA
TATGTCGTAC GTGTACGCTC CCCCGAAGGA GAAGAACATG TGCAGGATGA GCTACTCGAG
CAACTTACGC GCGGCGTCAT GCTGGAAGAC GGCACCGCAA AATTCGACAC GATTGAACGC
ATCGGCAACA CCGACTCACA CGACTGGTTT CGTATCGTCG TCAAAGAAGG CCGCAACCGC
GAAGTACGTC GGCTATGGGA ATCGCAAGGC TGCCAAGTCA GCCGCCTCAA ACGTACACGT
TATGGTTCAG TCCTCCTACC ACGCGAACTA CTGCGTGGCC AATCGACCGA ACTACCCAAG
ACCCAAGTAG AAGCACTACG CACCCAACTG AAACTAGAAA AAGACATGCC GTTAGCACTC
ACCCTGCAAC CGGTTATCGG CCAACGCCGT TCAGCCAAAG CCACACTGCA CGTGAATCGC
AACGACAACA ACAAACACGC CTACCACAAC AACCACAGCA CCGCCGATGA AAGTCGCGAA
CTGCGTCGCT TTGACACCCT GCGTGATGAC CGAGGTCACG GCCAAGGCAA GCACCACTTC
AAAGATAGAC TGACCGTCAG TGGCGAAGCT GCCGCAAAAC AAGCACACAA ACCCTTCAAA
CAATACAAAC CCAAGAACGA CCGTTCGCTA TCGGAAGGCA GCCCGGCAAC ATTCCAGAGC
TGGTACGTCC CTGAAGGCGT CAGCACCGGC CCCCGCAACC ACCGCAATGC TGGTGCTGAC
AATGGTGCCC ACCCCAACAA AAAAAGCCCA AACCCAAACA CCCGTAACAC ACAGGGACAA
CAAACACGCA AGTCTCCATA CAAATACACG AACAATGCAC CCAACTTCCC CTCCGACCAC
GCCACGCCAA CCTTCAACCC CTATGGCAAC CCTGGTCAGA AAACAGGAGC AGGCCGACCA
AACAACAGCG GTGGCAAATA CAACCGGAAT CGGGGACCAA GATACCCATA A
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| Protein sequence | MSDTPKPPSN TLSLKRETAT EAPKLEERLH KVLAQAGLGS RRALEQRISN GLIKVNGDIA
QLGMSVKSGD KIELDGRSFV ASALTEPARV LIYNKPEGEV TTREDPEGRP TVFETLPVLK
GARWIAIGRL DINTTGLLLL TTDGELANAM MHPSSEIERE YVVRVRSPEG EEHVQDELLE
QLTRGVMLED GTAKFDTIER IGNTDSHDWF RIVVKEGRNR EVRRLWESQG CQVSRLKRTR
YGSVLLPREL LRGQSTELPK TQVEALRTQL KLEKDMPLAL TLQPVIGQRR SAKATLHVNR
NDNNKHAYHN NHSTADESRE LRRFDTLRDD RGHGQGKHHF KDRLTVSGEA AAKQAHKPFK
QYKPKNDRSL SEGSPATFQS WYVPEGVSTG PRNHRNAGAD NGAHPNKKSP NPNTRNTQGQ
QTRKSPYKYT NNAPNFPSDH ATPTFNPYGN PGQKTGAGRP NNSGGKYNRN RGPRYP
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