| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1597 |
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| Symbol | rpsA |
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| ID | 6119425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1669096 |
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| End bp | 1670772 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641649581 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001776136 |
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| Protein GI | 170730703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTGA ATTGTTCGAA GCCAGCCAAG CGAATTTGGC GAAGCTAAAA
CCGGGTGCCA TCGTTACTGG AACCGTCGTG GATGTCCGTG GTGATGTAGT GGTTATTAAC
GCCGGTTTGA AGTCTGAAGG CATCGTGCCG ATTGAGCAGT TCCGTAATGA CGCTGGTGAG
ATTGATGTTG GGGTAGGTGA TCAGGTCAAA GTTGCCCTTG ATGCCATTGA GAATGGCTTT
GGCGAAACCA TTCTGTCTCG CGAAAAAGCA AAGCGCTCGA TGGTGTGGGA TGAGCTGGAA
GAGGCCTTGG AGAAGAATGA GACCATCAGT GGCCGTATTA ACGGTAAGGT CAAGGGAGGA
TTTACCGTTG ACATTAAGGA TGTACGTGCG TTTCTTCCTG CTTCTTTGGT CGATGTTCGC
CCGGTTCGTG ATCCTGCTTA CCTGGAAGGT AAGGAGCTGG AATTTAAGCT TATTAAGTTA
GATCGTAAGC GTAATAATGT CGTTGTTTCT CGTCGTGCAG TGGTCGAAAG CGAGCATTCT
GAGGAGCGCG AACAGTTGTT GGATAAGTTG CAGGAAGGCG CAGTGTTGAC CGGTACGGTT
AAAAATATGA CCGATTACGG CGCGTTCGTG GATTTGGGTG GAGTTGATGG CTTGCTCCAC
ATTACCGATA TGGCATGGAA GCGTGTGCGC CATCCCTGCG AGGTGGTGAA TATTGGTGAT
GAGGTTGAGG TTCGCGTACT GAAGTTTGAC CGTGAGCGCA ATCGTGTCAG CCTTGGTTTG
AAGCAGCTTG GTGAGGATCC CTGGGATAAT ATTTCGCGGC GTTATCCAGC TAACTGCCGA
GTGTTTGGTA AGGTTTCCAA CGTGACTGAC TATGGTGCAT TTGTTGAGAT TGAGGCAGGT
GTAGAGGGCT TGGTGCACGT CTCGGAAATG GATTGGACCA ACAAGAATGT CAACCCTTCC
AAGGTTGTTC AGGTGGGTGA TGAGGTTGAG GTTATGATCC TGGATGTCGA TGAGGAGCGT
CGACGTATCT CCTTGGGCAT GAAGCAGGTT GCCGCCAATC CGTGGGAAAC GTTTGCTCTT
ACCCATAAGA AGGGAGACAA GGTGAGCGGC CAAGTTAAGT CGATCACAGA CTTTGGCATT
TTCATCGGTT TAGACGGTGG TATTGATGGT TTGTTGCACT TGTCTGACAT TAGCTGGAAC
ACGACCGGCG AAGATATAGT CCGTAATTTC AAGAAGGGTG ATACCTTAGA AACAGTTGTG
TTGGCTGTCG ATCCAGAGCG TGAGCGTATT TCCTTGGGTG TGAAGCAGTT GGAACAAGAT
CCTTTTGGCC AGTATATGGC TACTCATCCG AAAGGCTCCA AGGTGATTGG AACCGTTAAG
GAAGTTGATG CCAAGGGGGC CTTGATTGAG TTGGATGAGG GAATCGAAGG TTACGTTTCG
GCACGTGACA TCGCTAATGA GCGTGTGGAT GACGCGACTC AGTATCTGAA GGTGGGCGAT
AGTGTGGAAG CTAAGTTTAT TGGTATGGAT CGTAAGGGCC GTACTTTACA GCTGTCGATT
AAAGCCAAAG ATGATGCTGA GATGCGCGAA GTTCTTGAGG AATATCAATC TTCTTCCGGT
GGTACTACAA AATTGGGTAC GCTGCTGAGA GAGCAACTCG GTAATAAGCC CGAGTAA
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| Protein sequence | MTESFAELFE ASQANLAKLK PGAIVTGTVV DVRGDVVVIN AGLKSEGIVP IEQFRNDAGE
IDVGVGDQVK VALDAIENGF GETILSREKA KRSMVWDELE EALEKNETIS GRINGKVKGG
FTVDIKDVRA FLPASLVDVR PVRDPAYLEG KELEFKLIKL DRKRNNVVVS RRAVVESEHS
EEREQLLDKL QEGAVLTGTV KNMTDYGAFV DLGGVDGLLH ITDMAWKRVR HPCEVVNIGD
EVEVRVLKFD RERNRVSLGL KQLGEDPWDN ISRRYPANCR VFGKVSNVTD YGAFVEIEAG
VEGLVHVSEM DWTNKNVNPS KVVQVGDEVE VMILDVDEER RRISLGMKQV AANPWETFAL
THKKGDKVSG QVKSITDFGI FIGLDGGIDG LLHLSDISWN TTGEDIVRNF KKGDTLETVV
LAVDPERERI SLGVKQLEQD PFGQYMATHP KGSKVIGTVK EVDAKGALIE LDEGIEGYVS
ARDIANERVD DATQYLKVGD SVEAKFIGMD RKGRTLQLSI KAKDDAEMRE VLEEYQSSSG
GTTKLGTLLR EQLGNKPE
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