| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1593 |
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| Symbol | |
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| ID | 6119421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1666166 |
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| End bp | 1667143 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641649577 |
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| Product | lipopolysaccharide core biosynthesis protein |
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| Protein accession | YP_001776132 |
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| Protein GI | 170730699 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATCC TATGGCAGTG GGTTGTACTG CACTTGATGG TGGCAGCGGT TGGTACGTGG
TTGTTGCGTC GCTACGCGCT TTGGCGCCGA TTGTTAGATC TGCCTTGTGA ACGTCGTAGT
CACCAAGTGG CGACCCCGCG TGGTGGTGGT ATGGCGATTG TGTTTACTTT GCTGTTTGGC
TGTGTTTTGG CTTGGTTGGG ATTACCGCAG TGGCGATTCC ATCTGGTTCT GTATGCGTGT
GGTTTTACGC TGATTGCTTC AATCGGTTGG TGGGACGATC ATCGTCCAAT ACCGGCTGTT
ATTCGCTTTG TGGTGCATTG TTTAGCTGCT ACCCTCCTTG GTGTGTTGAC CTTTACTGCA
TCTGGAACTT TGTGGCAAGC ATTTCTTGCT GCTGCGTTTG CACTTGTATT GGTGAATATA
TGGAACTTCA TGGATGGCAT TAATGGTCTG GCGACCACTC AGGCTGCGGT TGCAGCCATC
GCTTATGCCC TCGTTTTGCC GGGGCTTTTA GCGTGGGCGG GTTGGGCGCT TGCAGCTGCT
TGCCTAGGTT TTCTGCCGTT CAATTTTCCA CGTGCAAGGA TCTTCTTGGG TGACGGCGGC
AGCGGCGCGT TAGGCTATGC ATTAGCCGGA TTGATGGTGT TGGTCCTGAT CAAGGCGCAG
GTCAGTGTCT GGATAGTTTG GATTCCTTTG ACCGCGTTTC TTGTCGATGC AGGCTTGACC
TTGTTATCTC GCGTATTTTC TGGGCAGTGT TGGTGGCAGC CTCATGTTCA ACATGTCTAT
CAGCGTGCTG CCAGACGCTG TGGCTCGCAT ACCCCTGTCA CACTTACTTA TTTCGTTTTC
AGTGTGTCTA CCCTTGTCTT GTTTTTTGCC GTTACACATT TGTCTTTACT GAAGTGGGAA
GCGATGCAAT CGATGATTTT TTGTATTTTT TCCTGCTTTA TTTGGTTATT TCTGCGCCAT
GAATTGCGTG ACGACTGA
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| Protein sequence | MLILWQWVVL HLMVAAVGTW LLRRYALWRR LLDLPCERRS HQVATPRGGG MAIVFTLLFG
CVLAWLGLPQ WRFHLVLYAC GFTLIASIGW WDDHRPIPAV IRFVVHCLAA TLLGVLTFTA
SGTLWQAFLA AAFALVLVNI WNFMDGINGL ATTQAAVAAI AYALVLPGLL AWAGWALAAA
CLGFLPFNFP RARIFLGDGG SGALGYALAG LMVLVLIKAQ VSVWIVWIPL TAFLVDAGLT
LLSRVFSGQC WWQPHVQHVY QRAARRCGSH TPVTLTYFVF SVSTLVLFFA VTHLSLLKWE
AMQSMIFCIF SCFIWLFLRH ELRDD
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