| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1592 |
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| Symbol | |
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| ID | 6119420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1664246 |
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| End bp | 1666153 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641649576 |
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| Product | epimerase/dehydratase protein |
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| Protein accession | YP_001776131 |
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| Protein GI | 170730698 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCATT GGCGTAACTG CTTGGCCAGC GCTGTGCCTA AGTTGGCTGT CATTGCTCAT
GACTTGATCC AGGTTTGGGT ATGCTGGGTT GCTCTACATG CAGCGCGTTA CTCAATGTTG
GTGTACCCCC CGGGTTTGCC GTATGCCGAC TTGCGTACCC TGGTTGTTCT CATTGCGCAA
GCGGTTGTTT TCTGGCGAGT TGGTCTGTAT CGCGGTTTAT GGCGTTTTGC AAGCGTCCCT
GATCTTTGGA ATATCTTCAA ATCTGCTTTC TCTGGTCTGA TCGTGATTGT GTTGGTGTTG
TCGGTCACTC GGTTTGAGGG GGTACCGCTA TCTGTGTTGG TTGTTTATCC CTTTGCGTTG
TCAGTGTTGC TTGGGATGCC TCGGTTGCTG TATCGGGCTT GGAAAGACTA CCAATTGATT
CACCCGGTCG ATTCCTCTGA GCGTGTACTG ATCCTGGGTG CTGGGCGTAC CGCTGAGGCG
CTAGTACGCG ATATGCGCCG TACTGGTGCG TTTGTTCCTG TTGGTTTCAT TGACGATGCG
GTGTACCTGC GTGGCGCCAA AATTCAGGGC TTGAACGTTC TTGGTCGTTT GGAAGAAGTC
AGCACGATTG CCCGTGAGAC TGCAGCTAAA TTACTGGTGA TCGCGATCCC TTCGCTTGAC
GCTGCTGGCA TGCAGCGTGT GGTGGCGATG TGTGAAAGTA CTGGCTTGCC GTTCCGGATG
GTGCCTAAGC TGATTGATGT GCTCGAAGGC CGTACCCTGC CGGGTGAACT GAAGGAAGTT
TCAATTGAGG ACCTTCTCAA TCGCAAACCG GTGATTCCGG ACTGGCGTCT GATCCGTAGT
TGGTTATCTG GAAAGACTGT GATGGTGACG GGCGGCGGCG GTTCTATTGG CTCGGAGGTG
TGTCGTCAAT GTGCGCGTCA CGGTGCGAGC CGGGTAGTGA TCGTTGAGAT TGATGAGCTG
GCGTTGCTGA CGATTGATTC TGACCTACGC AGACTGTTTC CCGATATTGA GGTACTTCCT
ATTCTTGGTG ATTGCGGTGA TGCTGCTGTG ATCGCTCATG CATTGCGTTG CGCGCGTCCG
GATGCGGTGT TTCATGCAGC AGCCTATAAA CAAGTGCCAC TGCTCGAAGA GCAATTGCGC
GAGGCAGTAC GTAACAATGT TTTGGCGACC GAGAACGTGG CGCGCCATTG TGTTGCAGCC
AAAATTCAAA CTTTCGTGTT TATCTCTACC GATAAGGCGG TAGAGCCGGT GAATGTGCTT
GGTGCAACAA AGCGTTATGC GGAGATGATT TGTCAGAGCT TTGATGCTAA GCGCACTGGG
ACGCGTTTCG TTACCGTGCG TTTCGGCAAC GTGCTCGATT CGGCAGGCAG TGTGGTGCCA
CTGTTCCGTG AGCAGATTCG TCAGGGAGGT CCAGTGACGG TGACTCATCC AGACGTGACT
CGTTATTTCA TGACTATCTC CGAGGCTTGC CAGCTGATCT TGCAAGCTGC GGCGTTGGCA
TCGCATGGCG CGATTTACAC ACTCGACATG GGGGAGCCTG TACGGATCAA TTTGTTGGCC
GAACAGATGA TCCGTTTGGC TGGTAAGCAG CCGGGTCGCG ATATCGTCAT TGTTTACACC
GGATTGCGTC CCGGTGAGAA GATGCATGAA ACGCTTTTTT ATGCTGATGA AAATTATCGA
CCGACGGCAC ATCCTAATAT CCTTGAGGCG GATGTACGCG CGTTTCCCCA AGAGCAAGTG
TTGCAATCGG TGATGCGTCT ACGTGAGGCG GTGCAACATT ACGATACTGT CGAGATTGAG
TCGGTGATTA GTATGTTGAT GCCAGATTTC CATGCTGTAC GTCATAAAAA AGAAACAAGA
TTCGAAACAG TTGTCCCATT CCCAGCACGT GAGGTCAGAA GACTGTAA
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| Protein sequence | MIHWRNCLAS AVPKLAVIAH DLIQVWVCWV ALHAARYSML VYPPGLPYAD LRTLVVLIAQ
AVVFWRVGLY RGLWRFASVP DLWNIFKSAF SGLIVIVLVL SVTRFEGVPL SVLVVYPFAL
SVLLGMPRLL YRAWKDYQLI HPVDSSERVL ILGAGRTAEA LVRDMRRTGA FVPVGFIDDA
VYLRGAKIQG LNVLGRLEEV STIARETAAK LLVIAIPSLD AAGMQRVVAM CESTGLPFRM
VPKLIDVLEG RTLPGELKEV SIEDLLNRKP VIPDWRLIRS WLSGKTVMVT GGGGSIGSEV
CRQCARHGAS RVVIVEIDEL ALLTIDSDLR RLFPDIEVLP ILGDCGDAAV IAHALRCARP
DAVFHAAAYK QVPLLEEQLR EAVRNNVLAT ENVARHCVAA KIQTFVFIST DKAVEPVNVL
GATKRYAEMI CQSFDAKRTG TRFVTVRFGN VLDSAGSVVP LFREQIRQGG PVTVTHPDVT
RYFMTISEAC QLILQAAALA SHGAIYTLDM GEPVRINLLA EQMIRLAGKQ PGRDIVIVYT
GLRPGEKMHE TLFYADENYR PTAHPNILEA DVRAFPQEQV LQSVMRLREA VQHYDTVEIE
SVISMLMPDF HAVRHKKETR FETVVPFPAR EVRRL
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