Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1580 |
Symbol | |
ID | 6119408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1650379 |
End bp | 1651989 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641649565 |
Product | virulence factor |
Protein accession | YP_001776120 |
Protein GI | 170730687 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.716826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGC CCCATCTGCT TCGAGGATTG CTCTCCTTCA GTAGCATGAC CACCATTTCG CGTGTGCTGG GCTTGGTGCG GGACCAAGTG ATTTCCGCCC AGTTTGGTGC CAATGCCATC ACAGACGCCT TCATGGTGGC ATTTCGTGTA CCCAATTTCC TGCGTCGCCT GTTTGCCGAA GGCTCATTCG CGACGGCCTT TGTCCCGGTA TTTACCGAAG TCAAAGAGAC CCGCTCACAC ACTGATCTAC GCGCACTGAT GGCACGGGTT TCTGGCACCC TGGGCGGCGT CCTATTGGTC GTGACTGCAT TGGGACTGTT ATTGGCACCC CAGTTGGCTT GGCTATTCGG CAGTGGCGCC AATACTGACC CGGCGAAACA GGGATTGTTG ACGGAATTAT TTCGGCTGAC CTTCCCATTT CTGTTTTTCG TTTCCCTGAC TGCGCTGGCA AGCGGTGCAC TGAACAGCTT CCAGCGCTTT GCAATGCCGG CGCTGACCCC GGTCATCCTG AATTTGTGCA TGATTAGCGG TGCCTTGTGG CTGGCGCCAC GACTGCAAGT GCCCATCCTG GCCCTGGGGT GGGCCGTATT GGCTGCCGGC ATCCTGCAAT TACTGTTTCA ACTTCCGGGA TTGCGTCGTA TCGATCTGCT CACCCTGCCA CGCTGGGGCT GGAATCATCC TGATGTGCGC AAAATCCTCA CACTGATGGT GCCTACCCTG TTTGGTTCTT CCATTGCTCA AATCAACTTG TTAATGGATA CCTTCATTGC TGCCCGACTG AGCGATGGCT CCCAGACCTG GTTGTCACTG GCTGACCGCT TTCTGGAACT GCCACTGGGT GTCTTCGGTG TCGCCTTAGG CACCGTCATC TTACCGACCC TGGCACGCCA CCACGTCAAG ACCGACACCG CCAGTTTCTC CAATGCCTTG GACTGGGGAC TCCGCACCAC CTTACTCATT GCAGTCCCGG CGATGCTGGC CTTACTGCTG CTGGCTGAGC CATTGGTGTC CACACTATTC CAATACCATC ACTTCACCGC CTTTGATGTC CGCATGACGG CCCTTTCAGT CTATGGATTG AGTTTGGGCC TACCTGCCTT CGCACTACTC AAAGTGGTTC TTCCCGCGTT TTACGCCCGC CAAGACACCA GGACTCCAGT GCGTGCCGGC ATTGCTGCCT TGCTTACCAA TATGCTGCTG AATTTTGCAT TCCTAGCATT GCTGTACCAG CTGATGGTGC CCGACGCCCT GAAAGCCCAA GGCATCCTGG CCGCCCTGGG CCAACAGCCG GGATTGCATC TGGCCCTAGG CATCGCCAGC GCCTTATCCA GCTACCTCAA TCTTGGATTG CTTTGGTATT GGCTCAGCCG CAGCAACATC TACACTCACT CCCCAGGGTG GAGGCCATAC ATGCTACGTC TGACACTGGC ATGTGCCGCA ATGGCTGCAG TCCTACTGGC ACTGATGCAC TGGCGAACCG ATTTCCTCAC TATGGACCGT TGGCAAAAGA TGGGTTGGTT GGCGATTCTG GTGAGTGCAG GGGGAGGGAC CTACCTGGTG ACTCAAGTCC TCCTAGGCTG GCGCCTGCAT CACCTGCGCC CCAGTGCCTG A
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Protein sequence | MSKPHLLRGL LSFSSMTTIS RVLGLVRDQV ISAQFGANAI TDAFMVAFRV PNFLRRLFAE GSFATAFVPV FTEVKETRSH TDLRALMARV SGTLGGVLLV VTALGLLLAP QLAWLFGSGA NTDPAKQGLL TELFRLTFPF LFFVSLTALA SGALNSFQRF AMPALTPVIL NLCMISGALW LAPRLQVPIL ALGWAVLAAG ILQLLFQLPG LRRIDLLTLP RWGWNHPDVR KILTLMVPTL FGSSIAQINL LMDTFIAARL SDGSQTWLSL ADRFLELPLG VFGVALGTVI LPTLARHHVK TDTASFSNAL DWGLRTTLLI AVPAMLALLL LAEPLVSTLF QYHHFTAFDV RMTALSVYGL SLGLPAFALL KVVLPAFYAR QDTRTPVRAG IAALLTNMLL NFAFLALLYQ LMVPDALKAQ GILAALGQQP GLHLALGIAS ALSSYLNLGL LWYWLSRSNI YTHSPGWRPY MLRLTLACAA MAAVLLALMH WRTDFLTMDR WQKMGWLAIL VSAGGGTYLV TQVLLGWRLH HLRPSA
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