Gene Xfasm12_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1577 
SymbollspA 
ID6119405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp1645794 
End bp1646297 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content56% 
IMG OID641649562 
Productlipoprotein signal peptidase 
Protein accessionYP_001776117 
Protein GI170730684 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGAC CCACCCATCC CAACGCCCTG ATCTGGTTAC TGCTTTCCAT TGCCATCATT 
GCATTGGACC AAGCCACCAA AGCTTGGGTA CTCACCAGCC TCCCCGAATA CATCCCCGTC 
CCCGTTATTC ATGGATTCTG GAACTGGTAC CGCAGCTACA ACACCGGCGC CGCCTTTAGC 
TTCCTCAGCG ACGCCGGCGG CTGGCAAATG TGGCTCTTCA TTGCATTAGC TCTTGGCATC 
AGCGGCCTAC TTACCTTCTG GCTCTCCCGT ACCCCACGCC GCGAATGGCG CAGCGCATTG 
CCCTATGCAC TGATTATTGG CGGAGGCATC GGTAACGTCA TTGACCGCTT CCTCCATGGC 
CACGTCGTCG ACTTTATCCA ATGGTACGTC GGCTCCTACT ACTGGCCCTC CTTTAACCTT 
GCAGACTCAG CCATCGTCGC CGGAGCCATC GGCATCGGCC TACTGAGCCT ATTTGACAGC 
AAACACTCCC CAAAAACCCC ATAA
 
Protein sequence
MTRPTHPNAL IWLLLSIAII ALDQATKAWV LTSLPEYIPV PVIHGFWNWY RSYNTGAAFS 
FLSDAGGWQM WLFIALALGI SGLLTFWLSR TPRREWRSAL PYALIIGGGI GNVIDRFLHG 
HVVDFIQWYV GSYYWPSFNL ADSAIVAGAI GIGLLSLFDS KHSPKTP