| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1567 |
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| Symbol | |
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| ID | 6120008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1636595 |
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| End bp | 1638016 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649552 |
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| Product | hemolysin secretion protein D |
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| Protein accession | YP_001776108 |
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| Protein GI | 170730675 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.496852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA TGCTCCAAGG ATGGCGCGAC TTTCTTTCGC GTTACCTCCA CGTCTTCCGT
GCCGCCTGGT CGATTCGCGC CCAGCTAGAA CCACCTCACC GCACCACCGA TGAGCGCACC
TTCCTACCCG CCCATCTAGA ACTGACCGAA AGCCCGGTCT CCCCTACCGC ACTCTGGAGC
ATGCGGATCA TTATTGCCTG CTTCATCGTG GCTCTACTGT GGGCCTGCTT CGGCAAAATT
GAAATTGTTG CCGTCGCCCC GGGGAAAATC GTCGTCGACT CACGCACCAA AGTACTCCAA
CCACTAGAGA CCGCCGTAGT ACGCCGTATC CTGGTCCGTG ATGGCGAAAA AGTGAAAGCA
CACCAAGCAC TGATCGAACT TGATGCCACC GCCACCGGCG CCGAATACGC ACAAGCTGAA
GATGCCTTAC TCAATGCCAC ATTGACCGCA TTGCGCCTGC GCGCACTCTC CACCGCACTA
GAACGTGGCC AAACACCGCA ACTCACCCAT TCAGCAACCA TCCCCGCTGA TCGCATCGCC
GCCGAACAAG CACTGACACT CAGCCAATTC AATGCATACC AAGCCAAACG CCACAACCTA
CAAGCAACCA TTGCTCAACG CCGCGCCGAA CTACGGACAG CCCAAGACAC CATCGAACCA
TTGACCGAAT CCGCACGCAT CTCCAAAATG CGCTCCGCCG ATTACGCCAT ACTCCTCAAA
GACCAATACG TCGGCCGTCA CGACTACCTA CTGCGTGAAC AAGAACGCAT CACCGCCGAA
CGCGACTTAG CAACCCAACG CAACCGCATC CAAGAAATCC GCTCCGCCCT GAGCGCAGCC
CAAGAAGAAC TCAGCGTATT ACAAGCCGAC TTCCGCCAAC AAACCCTGGA TGACCTACGG
AAAGCCGACG AACAGATCGG CCAATTGACA CCACAACTCG CAAAAGCCAA ACAACGTAAT
CGACTCATGA CACTACGCTC CCCCGTTGAA GGCATCGTCC AGCAACTAGC CATCCACACC
GTTGGTGGCG TCGTGACCCC CGCACAACAA CTCTTAGCCG TGGTCCCAGT ACAAGAAACA
TTAGAAGTGG AAGCCACCGT CCTAAACAAA GACATCGGAT TTTTACGTCC CGAACAACAC
GTCACCGTCA AAATTGAAAG CTTCCCCTAC ACCCGCTACG GATACCTCAC CGGCAAAGTC
GTCAGCATCT CCCATGACGC CGCACAAGAC GAAAAACTAG GCTTGGTTTT TCCCGTACGC
ATCCGCTTAG ACAACACCAC ACTCACTATT GATGGAACAC AAATCAGAAT GAGCGCAGGC
ATGGCATTAA GCGCCGAAAT CAAAACAGGC AAACGCACCG TTATTGATTA CTTACTGAGC
CCACTAAAAC AATATACCGA CGAAGCATTG CGGGAACGAT AA
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| Protein sequence | MKHMLQGWRD FLSRYLHVFR AAWSIRAQLE PPHRTTDERT FLPAHLELTE SPVSPTALWS
MRIIIACFIV ALLWACFGKI EIVAVAPGKI VVDSRTKVLQ PLETAVVRRI LVRDGEKVKA
HQALIELDAT ATGAEYAQAE DALLNATLTA LRLRALSTAL ERGQTPQLTH SATIPADRIA
AEQALTLSQF NAYQAKRHNL QATIAQRRAE LRTAQDTIEP LTESARISKM RSADYAILLK
DQYVGRHDYL LREQERITAE RDLATQRNRI QEIRSALSAA QEELSVLQAD FRQQTLDDLR
KADEQIGQLT PQLAKAKQRN RLMTLRSPVE GIVQQLAIHT VGGVVTPAQQ LLAVVPVQET
LEVEATVLNK DIGFLRPEQH VTVKIESFPY TRYGYLTGKV VSISHDAAQD EKLGLVFPVR
IRLDNTTLTI DGTQIRMSAG MALSAEIKTG KRTVIDYLLS PLKQYTDEAL RER
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