| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1550 |
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| Symbol | |
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| ID | 6119991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1614624 |
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| End bp | 1617839 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641649536 |
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| Product | acriflavin resistance protein D |
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| Protein accession | YP_001776092 |
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| Protein GI | 170730659 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCTTTT CGACGATCTT TATCCGCCGC CCAATCGCCA CTTCACTGCT GATGTTCGGC
GTACTCCTAC TTGGGATCCT GGGCTACAAG AAATTACCGA TGTCGGCACT CCCTGAGGTC
GATGCACCTA GCCTGGTCGT CACCACCCAG TATCCGGGTG CCAACGCCAA GACAATGGCC
GCATTGGTGA CCACCCCACT AGAACATCAG CTCGGGCAGA TTTCTGGCTT GGACATGATG
AGTTCTGATT CCTCCGCTGG GTTATCAACA ATAACCCTGC AATTCTCAAC ACACAAAAAT
CTCGACATCG CCGCACAAGA CGTACAAGCA GCGATCCATC AGGCCACCCT GCCCTCAACA
TTACCTCACC AACCGATCTA CAACCGGGTG AATCCAGCTG ACGCGGCCAT CATCACCCTC
AAACTCACCT CTGATACCCT GCCACTACGC GAACTCAATA CATACGCAGA CGCTATCCTG
GCACAACGCC TCTCACAAAT ATCAGGCGTT GGTCTGGTCT CGATTGCTGG CAACGTCCGA
CCAGCGGTGC GTATCCAAGT GAATCCGGCG CAGCTATCCA ACATGGGCCT GACCATGGAA
TCGCTGCGCA ATACGCTGAC CCAAGCCAAC GTCAACGCAC CTAAAGGCTC GCTCAATGGC
AAGAACCAGT CCTACAGCAT CGGTACCAAC GATCAGCTGA AAGATGCTTC GCAATATCGG
GACACCATCA TCCATTACCA AAATGGACAT CCGGTTCGCC TCTCAGAGGT CGCCAATGTG
GTGGACGGCG TCGAAAATGA CCAGATCTCC GCTTGGGCCA ACGCAAAACC AGCCGTGCTG
CTGGAGATTC GCCGCCAGCC CGGCGCCAAC ATTATTCAGA CCGTCGAACA AATCCGCGCG
ATCCTGCCGC AGTTGCGTGC GGTACTACCT AATGATGTCC ATCTTGACGT TTTCTCCGAC
CGCACCGAGA CCATCCGCTC TTCCGTGCAT GAAGTGAAAT TCACCCTGCT ACTGACCATT
GGTCTGGTGG TCGCTGTGAT CTTTGTATTC CTGCGCCGAC TATGGGCCAC GCTCATTCCA
TCGGTGGCGG TCCCCCTATC ACTGGCCGGC ACCTTCAGCG TGATGGCGTT CAACGGGATG
TCACTAGACA ACTTCTCCCT GATGGCACTG GTCGTCGCCA CCGGCTTTGT CGTTGATGAC
GCGATTGTGA TGATCGAAAA CATCGTCCGC TACATTGAAC AAGGCAAGAG CGGACGCGAA
GCAGCGGAGA TTGGAGCACG TCAAATTGGT TTCACCATAC TCTCGCTCAC CATTTCGCTG
GTCGCCGTGT TTCTCCCCCT GCTGTTGATG CCTGGCGTCA CCGGCCGACT GTTCCACGAG
TTCGCCTGGG TCCTGTCGAC CGCCGTCGTC ATCTCGATGC TGGTATCACT GACCCTGACA
CCGATGATGT GTGCCTACCT ACTCAAACCC GATACTCTGC CCGAAGGTGA TAGCCCAACA
CCAAGCACCA AGATCACCCT GTGGACACGC ACTGTCGCAC TATACGAACG CACCTTAGAC
TGGGTGCTGA TGCACCAACA ACTGACCTTA GTTGTAGCGC TAGTGACAGT AGCACTCACC
ATCGTACTGT ATGTAACGAT CCCCAAGGGG CTACTGCCAG AACAAGACAC TGGACTCATC
ATCGGCGTTG TGCAAGCCGA CCAGGACATC GCATTCTCAC AGATGGAACA GCGTACCCGG
GCCGTGGCCG ATGCACTGCG CAAGGATCCC GCCGTGACAG GCGTCTCCGC ATTTATCGGT
GCCGACACCA TCAACCCCAC ACTCAATCAT GGCCAACTAT CGATCGTTCT CAAGCCACGC
AACCAACGTG AGGGGTTGAA CACCATACGC CCACGACTGC AACGCGCCGC AGCCGGCATC
CCAGGCATCG TCCTCTATCT AAAGCCGGTA CAGGATGTGA CTCTGGATAC CCACGTCGCT
GCAACCGAAT ACCAATACTC ACTCTCAAAC GTCGATGCAA CGGAGCTGGC TACCTGGGCC
ACACGCATGA CCGAGGCAAT GCGCCAGATT CCGGCACTGG CCGACGTAGA CAACAACTTG
GCCGACCAAG GGCGTGCCTT ACAGATCACT GTTGATCGTG ATAAAGCCAG CCTCCTTGGC
GTACCGATGC AGACTATCAA CGACACCCTA TATGACGCAT TCGGCCAGCG CCAAATCTCC
ACGATTTTCA CCGAACTCAA CCAATATCGG GTCGTCCTGG AAGTGGCCCC ACACTTCCGC
ACCAGCACCG CACTGATGCA GCAACTGGGA GTCGCCAGCA ACGGCAGCGG CGCACTGACT
GGCAGCAATG CCACGAGCTT CGGCCAAGCC GTCTCATCAA ACTCTTCCAC GGCCACAGGT
ATTGGCAACC TCAACACCGG AATGACCGTC GGTACTGGCC GTATCATCCC GCTGTCAGCC
CTTGCCGATG CTAAGGTCAC CAACGCTCCT CGCGTTATCA GCCATCAGCA GCAACTTCCC
GCCGTAACGA TCTCATTCAA CCTGGCCCAG GGGTATTCCC TCTCCCATGC CGTGAAAGCC
ATCGAACAGG CACGTACCCA ACTACAGATA CCTCCCCATG TACGCGCCCA GTTCATCGGT
AAAGCCGTCG AATTCACCAG TAGCCAGAGT GACATCGTGT GGTTGCTGCT CGCTTCGATT
GTGGTGATCT ACATCGTGCT GGGGATGCTA TACGAAAGTT ATATCCATCC GCTGACGATC
ATCTCCACAC TACCGTCGGC AGGCGTTGGC GCATTGCTGG CACTGATGCT CTGCGGACTG
AGCCTGTCGG TGGATAGCAT TGTCGGTATC GTGCTGCTGA TTGGTATCGT CAAGAAAAAC
GCAATCATGA TGATTGACTT CGCCATCGAA GCACGCAGCA CAGGGAGCAG CGCCCACGAT
GCGATCCGCC GCGCCTGTCT GTTGCGCTTC CGTCCGATCA TCATGACTAC TACCGCCGCA
CTGCTCGGCG CATTACCGCT AGCACTGAGC GACGGCATCG GCTCGGAATT GCGCCGTCCA
CTGGGCATTA CTATTGTCGG TGGCTTGCTG CTATCGCAGT TGATCACCTT GTACACCACG
CCTGTCATCT ACCTGTTCTT CGAACGGTTA TCCGAGCGCC TACGCCTCTG GCGTACACAC
CGTACCTCGG TCCAGGCCAC ACCACAGCGC GTATGA
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| Protein sequence | MGFSTIFIRR PIATSLLMFG VLLLGILGYK KLPMSALPEV DAPSLVVTTQ YPGANAKTMA
ALVTTPLEHQ LGQISGLDMM SSDSSAGLST ITLQFSTHKN LDIAAQDVQA AIHQATLPST
LPHQPIYNRV NPADAAIITL KLTSDTLPLR ELNTYADAIL AQRLSQISGV GLVSIAGNVR
PAVRIQVNPA QLSNMGLTME SLRNTLTQAN VNAPKGSLNG KNQSYSIGTN DQLKDASQYR
DTIIHYQNGH PVRLSEVANV VDGVENDQIS AWANAKPAVL LEIRRQPGAN IIQTVEQIRA
ILPQLRAVLP NDVHLDVFSD RTETIRSSVH EVKFTLLLTI GLVVAVIFVF LRRLWATLIP
SVAVPLSLAG TFSVMAFNGM SLDNFSLMAL VVATGFVVDD AIVMIENIVR YIEQGKSGRE
AAEIGARQIG FTILSLTISL VAVFLPLLLM PGVTGRLFHE FAWVLSTAVV ISMLVSLTLT
PMMCAYLLKP DTLPEGDSPT PSTKITLWTR TVALYERTLD WVLMHQQLTL VVALVTVALT
IVLYVTIPKG LLPEQDTGLI IGVVQADQDI AFSQMEQRTR AVADALRKDP AVTGVSAFIG
ADTINPTLNH GQLSIVLKPR NQREGLNTIR PRLQRAAAGI PGIVLYLKPV QDVTLDTHVA
ATEYQYSLSN VDATELATWA TRMTEAMRQI PALADVDNNL ADQGRALQIT VDRDKASLLG
VPMQTINDTL YDAFGQRQIS TIFTELNQYR VVLEVAPHFR TSTALMQQLG VASNGSGALT
GSNATSFGQA VSSNSSTATG IGNLNTGMTV GTGRIIPLSA LADAKVTNAP RVISHQQQLP
AVTISFNLAQ GYSLSHAVKA IEQARTQLQI PPHVRAQFIG KAVEFTSSQS DIVWLLLASI
VVIYIVLGML YESYIHPLTI ISTLPSAGVG ALLALMLCGL SLSVDSIVGI VLLIGIVKKN
AIMMIDFAIE ARSTGSSAHD AIRRACLLRF RPIIMTTTAA LLGALPLALS DGIGSELRRP
LGITIVGGLL LSQLITLYTT PVIYLFFERL SERLRLWRTH RTSVQATPQR V
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