| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1539 |
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| Symbol | |
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| ID | 6119980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1605787 |
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| End bp | 1606860 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641649527 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001776083 |
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| Protein GI | 170730650 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGC AAATTTTGAT TCTCCCCGGC GATGGCATTG GACATGAAAT CGTTGCTGAA
GCCGTTAAAG TGTTAGAGCA TGTTAATGTG CGTCATACGC TGAATATGAG GTTGAGTTTC
GACGCACTTG GTGGGGCTGC TTATGAAAAA TATGGAAGTC CACTGGCTGA CGAAACCTTG
GCGCGCGCAC GTGAGGCGGA TGCAGTGTTG CTTGGTGCGG TCGGTGGACC ACAGTGGGAT
ACGATTGATC CGGCACTTCG TCCAGAACGG GGGTTGCTGA AGATTCGTGC TCAATTAGGG
CTGTTCGCCA ATCTGCGTCC TGCGTTGTTG TACCCGCAAT TGGCAGATGC ATCCACCCTT
AAACCTGAAG TTGTTGCCGG ACTCGATATT CTTATCGTGC GTGAACTGAC AGGTGGCCTT
TATTTTGGAC AGCCACGCGG CAGCCGCATA TCAAAAAATG GCGAGCGTGA AGCGTTTGAT
ACGTTGCCGT ATTGCGAGAG TGAAATCCGT CGTATTCTCA AGGTTGGTTT TGAAATGGCG
CGTCTGCGTG GTAAGAAACT CTGCTCTGTG GACAAAGCAA ATGTGCTTGC TTCCAGTCAG
TTATGGCGCA CAGTGGCGGG AGAAATGGCT AAAGATTATC CAGATGTGAC CCTCTCGCAC
ATGTATGTGG ATAACGCAGC AATGCAATTA GTGCGTCATC CAAAACAGTT TGATGTGATT
GTCACTGAAA ATATGTTTGG TGACATTCTT TCGGATCAGG CGTCAATGTT GACCGGTTCG
ATTGGTATGT TGCCGTCTGC GTCGTTGGAC GCCAATAACA AAGGGATGTA CGAGCCGTGT
CATGGTTCGG CACCCGATAT TGCAGGACAA GGGGTCGCCA ATCCATTAGC GACGATTTTA
TCAGTGGCGA TGTTATTGCG TTATAGCATG GGATATATCA AAACAGCGGA TGCGATTGAA
TATGCGGTTG GTGTCGTTCT TGATAGTGGT TTGCGTACAG CCGATATTTG GTCCGAAGGG
ATGACCAAGG TAGGAACTGT AGCAATGGGA GATGCCGTGG TCGCAGCGCT CTAA
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| Protein sequence | MSKQILILPG DGIGHEIVAE AVKVLEHVNV RHTLNMRLSF DALGGAAYEK YGSPLADETL
ARAREADAVL LGAVGGPQWD TIDPALRPER GLLKIRAQLG LFANLRPALL YPQLADASTL
KPEVVAGLDI LIVRELTGGL YFGQPRGSRI SKNGEREAFD TLPYCESEIR RILKVGFEMA
RLRGKKLCSV DKANVLASSQ LWRTVAGEMA KDYPDVTLSH MYVDNAAMQL VRHPKQFDVI
VTENMFGDIL SDQASMLTGS IGMLPSASLD ANNKGMYEPC HGSAPDIAGQ GVANPLATIL
SVAMLLRYSM GYIKTADAIE YAVGVVLDSG LRTADIWSEG MTKVGTVAMG DAVVAAL
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