| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1525 |
|---|
| Symbol | |
|---|
| ID | 6119966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1588999 |
|---|
| End bp | 1590006 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641649513 |
|---|
| Product | beta-hexosaminidase |
|---|
| Protein accession | YP_001776069 |
|---|
| Protein GI | 170730636 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.276065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGA TTGGTGTGGC GGGTACGACG CTCAGTGCTC AGGAGGTGGA TTGGTTGCAG
GACGATGCGG TGGCCGGTGT TGTGTTGTTT AAGCGTAATT TTGCTTCACG TGCGCAAATT
GTCGAATTAT CGGCTGCGCT GCGTGAAGCT GCGCCGCGGC CGCTGTTGTT GGCGGTTGAT
CAGGAGGGGG GGCGTGTGCA GCGCTTCTAT GAGGGCTATA GTGCGTTACC ACCATTACAG
GGGATTGGTG CATTGTATGT ACGCGATCCG GAGGCGGCAT TGGAGTTGGC GTTCGAACAT
GCTTGGTTGA TGGCCAGTGA AGTTCGAGCC AGTGGTGTGG ATTTAAGTTT TGCTCCGGTG
GTCGATCTTG GGCGTGGCAA TCGTGCGATT GGCGATCGTG CTTTCAGTGA TGATCCGCAC
GTGGTGGCGG CGTTTGCCCA GGCCTATGTG CAGGGGATGC ATGCTGCTGG TATGCCAGTG
ACGCTTAAGC ATTTTCCTGG GCATGGTAGT GTTCTGGAGG ATACACACGT TGATCTTGCA
GTGGATGTGC GTCCGTTGGA AACGCTTGAG TCTGAGGATT TGGTGCCGTT TGCGGCAGGC
ATTGCTGCCG GTGCTGATGC AGTGATGATG GCACATGTAG TTTATCCAAA TGTCGCCCCT
GAAACGGCAG GTTTTTCTGC GCATTGGATC GAGGTTATTT TACGTGGGCG CATGGGGTTT
CGGGGGGTGG TTTTTTCCGA TGACATCGGT ATGGCTGCTG TGCGTGGCGT TGGTGGTGTT
GTTGGCTGTG TGCACGCGCA TCTTGATGCT GGTTGTGATG TGGTTCTGGT GTGTCATCCA
GAATTGGTGA ACGATGCGCT ATCTGCTGTT GCTGGCCGTC GTTCCAATAC GGCTGCTCTT
ATTGGTTTGA TCGGTCGCGG TGCGCTTGGT TGGGATGGGC TACTGGCCGA TGTTCGTTAT
GGTTCCATTC AATCCCGTTT ATTTGAACGA TTCGGAACAT CCACTTGA
|
|---|
| Protein sequence | MLLIGVAGTT LSAQEVDWLQ DDAVAGVVLF KRNFASRAQI VELSAALREA APRPLLLAVD
QEGGRVQRFY EGYSALPPLQ GIGALYVRDP EAALELAFEH AWLMASEVRA SGVDLSFAPV
VDLGRGNRAI GDRAFSDDPH VVAAFAQAYV QGMHAAGMPV TLKHFPGHGS VLEDTHVDLA
VDVRPLETLE SEDLVPFAAG IAAGADAVMM AHVVYPNVAP ETAGFSAHWI EVILRGRMGF
RGVVFSDDIG MAAVRGVGGV VGCVHAHLDA GCDVVLVCHP ELVNDALSAV AGRRSNTAAL
IGLIGRGALG WDGLLADVRY GSIQSRLFER FGTST
|
|---|
| |