Gene Xfasm12_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1504 
SymbolthyA 
ID6119945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1570115 
End bp1570909 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID641649493 
Productthymidylate synthase 
Protein accessionYP_001776049 
Protein GI170730616 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAGT ACCTTGAATT ACTGAATGAT GTGCTTGTGC ATGGCATACA AAAGCCTGAC 
CGCACTGGCA CGGGGACACG CAGTGTGTTC GGTTGGCAGA TGCGATTTGA CTTGAGCCAA
GGTTTTCCAC TCGTTACGAC TAAAAAGCTG CATTTGCGTT CGATCATTCA CGAGTTGCTA
TGGTTTCTCA GGGGGGAAAC CAATATTGCT TATCTTAAGA AGCATCAGGT ACACATCTGG
GACGAGTGGG CCGATGCCAC GGGTGAGTTG GGACCTGTTT ACGGCAAGCA ATGGCGCCGT
TGGGCTGGCG CGGATGGTCA CGAGATCGAC CAAATCCGTT GGTTGGTGGA GGAGATCAAG
CGTAATCCAG ATTCGCGCCG CTTGGTGATT AGTGCTTGGA ATGTGGCTGA TCTTCCACAG
ATGGCTTTGG TGCCGTGCCA TGCACTATTT CAATTCTATG TTGCCAATGG CAAATTGAGC
TGTCAGCTTT ATCAACGTAG CGCTGATATT TTTCTTGGCC TCCCTTTCAA TATCGCTAGT
TATGCACTGC TCACCCATAT GTTGGCTCAG GTGACTGGGC TCGTGGTCGG TGATTTTGTG
CATACGTTGG GTGATGCACA TTTGTATGCG AATCATGTCG AGCAAGCATC CGTGCAACTG
GGGCGTGTGC CGCGACCGCA ACCGGTATTA AGGCTTAATC AGGCAGTGAC TGACTTGTTC
GACTTTACCT ACGATGACAT TGTGATTGAA GGTTACGATC CATATCCGGC TATCAAGGCA
CCGGTGGCTG TGTGA
 
Protein sequence
MKQYLELLND VLVHGIQKPD RTGTGTRSVF GWQMRFDLSQ GFPLVTTKKL HLRSIIHELL 
WFLRGETNIA YLKKHQVHIW DEWADATGEL GPVYGKQWRR WAGADGHEID QIRWLVEEIK
RNPDSRRLVI SAWNVADLPQ MALVPCHALF QFYVANGKLS CQLYQRSADI FLGLPFNIAS
YALLTHMLAQ VTGLVVGDFV HTLGDAHLYA NHVEQASVQL GRVPRPQPVL RLNQAVTDLF
DFTYDDIVIE GYDPYPAIKA PVAV