| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1500 |
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| Symbol | |
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| ID | 6119941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1565842 |
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| End bp | 1567026 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641649489 |
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| Product | ABC transporter sodium permease |
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| Protein accession | YP_001776045 |
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| Protein GI | 170730612 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.809114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGT TTTCTACTTT ATGGACGGTG ATTTGCAAGG AATTACGGGA TATCCTGCGT
GATCGCCGCA CCCTTGTTCT GTCACTGCTG CTGACACCGC TGCTCTATCC TTTGATTATT
CTAGGTATGG GGATGCTGAG TGAGTCGCGG GTCAAGACGC AAGTGGATCA GTTGCTGGAA
GTGCCTACGA TCGGACGCGA GTACGCGCCT ACCTTGATAA ATTTTCTTGC GGCTAAACGT
CTAAATGCAG TTGCCCCTTC AAGTGATGTG GTCACGGCGA TCCACACACA GCAGATTGAC
GTTGCCTTGC GTATTGATCC TGGCTATGCC GATGCTTGGC GAGAAGGACG TCCGGCCCTG
GTGGAGATTG TGTACGATGC CACGCGCCGT GATGCTGAAA TCCCGGTTGC ACGTTTGAAG
GACGCCTTGA ATGCTTACAG TCAGCAGGTC GGCATGCTGC GGTTACTGGC AAGGGGGATC
GATCCGCAAG TGGTTCGCCC GATCGAAATA AGTACGTGGG ATTTGGCAAC GCCCGATGCC
AAACGTGCTT TGTTGATGTC GGTGATCCTT CCGATGTTGT TGGTGATTAC ATCCTTCATC
GGTGGTGCGT CGTTGGTGTT GGATGCCACT GCTGGTGAAC GTGAGCGGCA GTCACTGGAA
CCATTGTTAA CGACACCAGT GTCACGTCAT ATCATCGTGA GTGGGAAGAT TGTCGCAGCG
TGTGCGGTTG GCTTGCTCTC GTTATTACTG ACGTTGCTCG CATTTAAACT CAGCGCCCAG
CTGGCAAGTG CTGAAATGAG TCAGCAGCTC AATGTCGGGT TCATACCGAT GTTACAGATG
CTGTTTATTC TTTTGCCGGT GCTGTTCATG GGGACCGCGC TGTTAACCTT TCTGGCTGCT
GCAGCTAAAA GTGTGAAAGA AGCGCAGTCC CATATGGCAT GGTTGCTATT GCTGCCGGTA
CTGCCCAGCT ACGCGATGAT GGCGTATCCA TTAAAAAGTC AGCTATGGCA ATTTGCGATC
CCATTCTTGG CACAAAACCA GTTATTACAG AAAGTGATCA GGAATGAAGT GGTTGGGATT
GAGGTATGGG CAATTTACCT AAGCATGAGT TTTGGTTTGG CTCTGTTGTT ATGGTGGGCA
GCGGTACGGC GTTACTGTAA GGAGCAACTC GCAGTTTCCG ATTAA
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| Protein sequence | MSAFSTLWTV ICKELRDILR DRRTLVLSLL LTPLLYPLII LGMGMLSESR VKTQVDQLLE
VPTIGREYAP TLINFLAAKR LNAVAPSSDV VTAIHTQQID VALRIDPGYA DAWREGRPAL
VEIVYDATRR DAEIPVARLK DALNAYSQQV GMLRLLARGI DPQVVRPIEI STWDLATPDA
KRALLMSVIL PMLLVITSFI GGASLVLDAT AGERERQSLE PLLTTPVSRH IIVSGKIVAA
CAVGLLSLLL TLLAFKLSAQ LASAEMSQQL NVGFIPMLQM LFILLPVLFM GTALLTFLAA
AAKSVKEAQS HMAWLLLLPV LPSYAMMAYP LKSQLWQFAI PFLAQNQLLQ KVIRNEVVGI
EVWAIYLSMS FGLALLLWWA AVRRYCKEQL AVSD
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