| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1499 |
|---|
| Symbol | |
|---|
| ID | 6119940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1564700 |
|---|
| End bp | 1565815 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641649488 |
|---|
| Product | TonB protein |
|---|
| Protein accession | YP_001776044 |
|---|
| Protein GI | 170730611 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAAC TGAAGATGAG CCGTACCGTA CCATTGAGCA CACCAATATT GCTTTTACTA
GCGATGCTAG TGGCATGTTC CAAGCAAGAC GATGAATCGG CTCCCATCGC AGATGCACAA
AGCACACCCA CTGTCCAAGG GACAGGATCA GCATCGCCAT CATCATCACA AAATATGGCT
TTGGATCAGT TACACGAAGC CGCAACTCAA GCGCTACGTG ATAATCGAAT GTATGCACCC
GCCGGAAACA ACGCCGTCGA GTACTACTTA GCACTCCGTG AAAAACAACC CCAAGACGCC
ATCGTCAACA GCGCCTTGAC CGATTTACTA CCTTACACGC TCATCGCAGC AGAACAAAGC
ATTCACCGGA AAGACTTCGA TGAAGCCAGA CGCTTGGTGA ATCTGATTGA AAAAGTGGAT
CCCAACGCAC CAGCATTTCC ACGTCTAAAA CAGGCGTTAA TGAGCGACAC ACATACAAAA
AAATCAGACT CTCAAAAAAT CGTAGAACAT AATTCCAATA AGAAAACCAG TGAGCAGGCA
CACGAAAGGA TGGCCGAGCA ACGTGAAGTG GCCGAGCAAC GTGAAAGAGT CCGTCAGGAA
ATAAACGATT TCGAACGTCA AACCCCAATC AAACGCGATG TTGAGCAACG CACCACACAA
CAACTTAGCT CACCAGTAGC GGTGCCGATA CTGATACAGC CTTCAGTCAA AACACAAGGA
TCTGCAGCTG CTATCACTAC AACAACGCCC ACAACAACAA TATCCACAAC GACACCACAG
ACACCTATAA CAACAGCTGT ACCTGCAACA ACACAGGGAA CTGCACTCTC ACCCATATCG
GTAAAAGCTC CCCCTATAGC ACCAAACCTA CGGCCGATCA GTACGCCAGC ACCAAGGTAT
CCGACAGAGG CGCTACGCGC CGGTATCTCC GGGGAAGTAG TGGTGGAAAT CAAAGTAAGC
ACTGACGGCT CAGTCGCCAA TGCAAGGGTG GTGCAATCCA CACCAGCTCG CGTATTTGAT
CGAGAGGCAC TGCACACAGT CAAAAGGTGG AAATTCGAGC CAATGAAGAA CATGGTCACG
ACGCGCCGCA CGCTATCGTT TACCCCAGGT AACTGA
|
|---|
| Protein sequence | MLQLKMSRTV PLSTPILLLL AMLVACSKQD DESAPIADAQ STPTVQGTGS ASPSSSQNMA
LDQLHEAATQ ALRDNRMYAP AGNNAVEYYL ALREKQPQDA IVNSALTDLL PYTLIAAEQS
IHRKDFDEAR RLVNLIEKVD PNAPAFPRLK QALMSDTHTK KSDSQKIVEH NSNKKTSEQA
HERMAEQREV AEQRERVRQE INDFERQTPI KRDVEQRTTQ QLSSPVAVPI LIQPSVKTQG
SAAAITTTTP TTTISTTTPQ TPITTAVPAT TQGTALSPIS VKAPPIAPNL RPISTPAPRY
PTEALRAGIS GEVVVEIKVS TDGSVANARV VQSTPARVFD REALHTVKRW KFEPMKNMVT
TRRTLSFTPG N
|
|---|
| |