Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1496 |
Symbol | |
ID | 6119937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1560328 |
End bp | 1561656 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641649485 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001776041 |
Protein GI | 170730608 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGTA GCACACATGA CTATTGGATC GCACACCAGG GCACCCCACT GCATGGGGTC CTGAGTATTC CCGGCGATAA ATCAATCTCC CATCGTGCAG TCATGTTTGC TGCCCTTGCG GATGGCACGT CACGTATTGA TGGCTTTCTT GAGGCGGAGG ATACGCGCTC TACAGCAGCG ATCTTGGCCC GATTGGGTGT GCGTATCGAA ACTCCCTCAT TCACGCAGCG CATCGTCCAT GGTGTTGGTG TGGATGGACT CCAGGCATCG GATATTGCCC TGGATTGTGG CAATGCAGGC ACTGGCATGC GCCTGCTCGC TGGTTTGCTG GTAGCGCAGC CTTTTGACAG CGTTTTAGTC GGAGATGCAT CACTGTCCAA GCGACCGATG CGACGTGTGA CGGATCCGCT GTCACAGATG GGCGCACGTA TCGATACCAG CGACGATGGT ACTCCACCGC TGCGTATTTA CGGTGGTCAA TTACTCCGCG GTATCGATTT TATCTCCCCG CTGGCCAGTG CTCAGATCAA GTCAGCGGTG TTGCTGGCTG GATTGTATGC ACGTAACGAA ACGGTAGTGC GTGAACCGCA CCCGACGCGT GATTACACCG AGCGTATGCT CACTGCGTTT GGTGTGGACA TTGATGTTTC CACAGGGTGT GCGCGCTTGC GTGGTGGGCA ACGGTTATGT GCTACCAATA TTACAATCCC GGCTGATTTT TCCTCAGCTG CGTTTTATCT GGTTGCAGCC AGCGTGATTC CTGGCTCTGA TATCACCCTG CGTGCTGTTG GACTCAATCC GCGTCGTATT GGTTTGTTAA CCGTGTTGCG GCTGATGGGG GCAGATATTG TTGAATCCAA TCGCCATGAA CAGGGTGGTG AGCCGGTTGC TGACCTACGT GTGCGTTATG CGCCACTCCA GGGCACGCGT GTTCCTGAAG ATTTGGTGCC GGATATGATT GACGAATTCC CTGCCTTGTT TGTCGCTGCA GCGGCAGCCG AAGGTCAAAC GGTAGTGAGT GGTGCGGCTG AACTACGCGT TAAAGAATCG GACCGGTTGG CTGCGATGGT GACAGGCTTG CGCGTGCTTG GCGTTCAGGT GGATGAGATC GCCGACGGGG CAACGATTCA TGGAGGGCCC ATCGGTCATG GCACCATCAA CAGCCATGGC GATCATCGCA TCGCCATGGC GTTTTCAATT GCAGGGCAGC TTTCCGTCAG TACAGTACGT ATTGAAGATG TCGCCAATGT TGCGACTTCT TTTCCAGACT ATGAGACGTT AGCGCGCAGC GCTGGTTTCG GTCTTGAGGT GTACTGCGAT CCAGCATGA
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Protein sequence | MSRSTHDYWI AHQGTPLHGV LSIPGDKSIS HRAVMFAALA DGTSRIDGFL EAEDTRSTAA ILARLGVRIE TPSFTQRIVH GVGVDGLQAS DIALDCGNAG TGMRLLAGLL VAQPFDSVLV GDASLSKRPM RRVTDPLSQM GARIDTSDDG TPPLRIYGGQ LLRGIDFISP LASAQIKSAV LLAGLYARNE TVVREPHPTR DYTERMLTAF GVDIDVSTGC ARLRGGQRLC ATNITIPADF SSAAFYLVAA SVIPGSDITL RAVGLNPRRI GLLTVLRLMG ADIVESNRHE QGGEPVADLR VRYAPLQGTR VPEDLVPDMI DEFPALFVAA AAAEGQTVVS GAAELRVKES DRLAAMVTGL RVLGVQVDEI ADGATIHGGP IGHGTINSHG DHRIAMAFSI AGQLSVSTVR IEDVANVATS FPDYETLARS AGFGLEVYCD PA
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