Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1485 |
Symbol | |
ID | 6121348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1553427 |
End bp | 1554839 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641649475 |
Product | hypothetical protein |
Protein accession | YP_001776031 |
Protein GI | 170730598 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC GCCCCTACCA ACACACCATC GTTGATTTCA TCCTGACGCA CCCACGCTGC AATCTATTCG TGCCAATGGG TTTAGGAAAG ACGGTGGCAA CGCTGACGGC GTTAGATGTG CTCCTGGTGG TCGAAGACAT TGCGCCTATT TTGGTGATTG CTCCGCTGCG CGTTGCTGCC ACGACATGGC CGGATGAGGT GGCCAAGTTC CCCCATTTGC GCCATCTGCG GGTGTCCGTG GTCGTGGGTA GTGCGGCGGC ACGTCGCCAC GCCTTGGAGC AGGACGCGGA TATCTACTGC ATTAATTACG ACAATCTGAA ATGGTTAGTG GAGTTTTATC AGGACCGTTG GCCGTTCCGT ATGGTGGTCG CCGATGAGTG CTCCAAGCTG AAAGGGTTCC GGCTGCGGCA AGGAACACGG CGGGCCCGCG CACTGGCCAA GCATGTGCAC ACCAAGGTGG AGCGTTACAT TGGGTTGACC GGAACGCCCG CGCCGAATGG GCTACAGGAC CTGTGGGCGC TGATGTGGAT GGTGGATCGT GGGGCACGGC TTGGGACTCA TTTTAAAGCG TTTATCGATC GCTGGTTCCG TGCGGTGCAG ATCGGCAGTG ATCCGCATGC GGTGCGCCTT GTGCCCGCGC CAAATGCATC TCAAGAGATT CAAGACAAGA TACGCGACCT CTGTTTATCA CTTGATCCAC ATGCGTATTT CGATTTACGC CAGCCGATTG TCAATACGAT TCGCGTTGCG TTGCCAGAAC ATGCGCAACG TCTGTACAAG GCCATGGAAC AAGACATGTT CATCGCCTTG GAATGCGGTA CCGAAGTAGA AGCCTTTAAC GCCACCAGTA AAACCATAAA ATGCCTGCAA CTGGCCAATG GTGCGCTGTA TACCGATGAC ACACGCCAGG CTTGGGAAGT CGTCCACGAC GCAAAACTAG AGGCGCTGCA CGACATTATC GAAGAAGCCG CCGGTATGCC GGTGTTGGTG GCGTATCACT TTAAAAGTGA TGTAGCACGG TTGCAGCGTG CCTTCCCCAA GGGACGTGCT TTGGACAAAA ACCCCGACAC GATCCGCGAT TGGAATGCGG GGAACATTCC CGTGCTATTT GCCCATCCGG CCAGTGCCGG TCATGGCTTA AATCTGCAAG ACGGCGGAAA TATTTTGGCC TTCTTCGGCC ACTGGTGGGC GCAGGTACGT AACGGCGTGT TGATGCGCAC CTGCACCGTG TGCGGCGGCA GTGGCACGGT TCCGATTAGT GATCGTAAGC GCGCGGCGGC GCTTGGCCGT GATGTATCTA CGTACTGCAT GCGGTGGCGC GGCCTGTACG AATGGCTATT AGAAAAGCTG CGCGCGGCGG AACAGCACGC GGCGGCGGAG CTGAAAGCGG CGTTACTGGA AGACGCTGCA TAG
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Protein sequence | MNLRPYQHTI VDFILTHPRC NLFVPMGLGK TVATLTALDV LLVVEDIAPI LVIAPLRVAA TTWPDEVAKF PHLRHLRVSV VVGSAAARRH ALEQDADIYC INYDNLKWLV EFYQDRWPFR MVVADECSKL KGFRLRQGTR RARALAKHVH TKVERYIGLT GTPAPNGLQD LWALMWMVDR GARLGTHFKA FIDRWFRAVQ IGSDPHAVRL VPAPNASQEI QDKIRDLCLS LDPHAYFDLR QPIVNTIRVA LPEHAQRLYK AMEQDMFIAL ECGTEVEAFN ATSKTIKCLQ LANGALYTDD TRQAWEVVHD AKLEALHDII EEAAGMPVLV AYHFKSDVAR LQRAFPKGRA LDKNPDTIRD WNAGNIPVLF AHPASAGHGL NLQDGGNILA FFGHWWAQVR NGVLMRTCTV CGGSGTVPIS DRKRAAALGR DVSTYCMRWR GLYEWLLEKL RAAEQHAAAE LKAALLEDAA
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