| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1473 |
|---|
| Symbol | |
|---|
| ID | 6121336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1543154 |
|---|
| End bp | 1544086 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641649465 |
|---|
| Product | chromosome partitioning protein |
|---|
| Protein accession | YP_001776021 |
|---|
| Protein GI | 170730588 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC CCAGCCTCCC CCTCAAGAAG CGCGGCCTGG GTCGTGGTCT TGAAGCCTTG
CTTGGGTCTA AGGGTGGATC TTCTGTCCCA CCAACGGTTG CCGAGGAGCA GTTACCTGGC
GAAGTACTGC GTACCTTGCA GATCACGCAA TTACAACCTA GTAAGTATCA GCCGCGGCGA
GAGATGAGTG AAGCCAAGCT GGCAGAGCTT GCTGATTCGA TCAAGGCACA GGGGGTGATT
CAGCCGATCA TCGTGCGTGA GTTGGATGTG GATATGTTTG AGATTGTTGC TGGGGAGCGC
CGTTGGCGGG CCTCGCAATT GGTTGGGCTG ACAGAAGTGC CGGTGATCGT TCGTGAGTTA
GATGACCGTA CCGTTGTTGC GATGGCGCTG ATTGAAAACA TCCAGCGCGA GGATCTTAAT
CCACTTGAGG AAGCACAAGC GCTACAGCGA CTGATTGATG AGTTTTCGTT AACCCATGCT
GAGGCGGCTG AGGCTGTTGG TCGTTCACGT GCGGCGGTGT CTAATCTTTT ACGTTTACTT
GAACTTCCTC TGGGCATCCG TACGCTGCTG GAGTCCCATC AGTTGGAGAT GGGGCATGCC
CGTGCGTTGT TGACTCTGGC TCCCGAGCTG GCTGCCAAAT TGGCCAAGGA AGCAGCTGAC
CAAGGGTGGT CAGTCCGTGA GGTCGAGCAC CGTGCTCAGC AATTTGCTGC TGGAAAAGTG
CCAGACATCC GTGACAAGAA GTCCAAGTCG CCCGCGAGTG CTCCTGCGCA ACCCGACATC
GCCTCGTTGG AAACGGAGTT GTCTGAGCGT TTGGGTACAA AAGTGGCGAT CAATCATGGC
CGTGCTGGTA AAGGTAAATT GGTCATCCAC TACACCGACT TGGATGTCCT TGATGGTGTT
TTGGAGAGAT TGCGTGCTCG TGCGGTTGGT TAA
|
|---|
| Protein sequence | MNKPSLPLKK RGLGRGLEAL LGSKGGSSVP PTVAEEQLPG EVLRTLQITQ LQPSKYQPRR
EMSEAKLAEL ADSIKAQGVI QPIIVRELDV DMFEIVAGER RWRASQLVGL TEVPVIVREL
DDRTVVAMAL IENIQREDLN PLEEAQALQR LIDEFSLTHA EAAEAVGRSR AAVSNLLRLL
ELPLGIRTLL ESHQLEMGHA RALLTLAPEL AAKLAKEAAD QGWSVREVEH RAQQFAAGKV
PDIRDKKSKS PASAPAQPDI ASLETELSER LGTKVAINHG RAGKGKLVIH YTDLDVLDGV
LERLRARAVG
|
|---|
| |