Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1466 |
Symbol | |
ID | 6121329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1537302 |
End bp | 1538048 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641649459 |
Product | hypothetical protein |
Protein accession | YP_001776015 |
Protein GI | 170730582 |
COG category | [S] Function unknown |
COG ID | [COG1636] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.828148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTCCC CCATTCCTAC TCGCCAACCT CTACAACTTC CACAAGGCCA GCGCCTGCTA TTACATTCGT GCTGCGCTCC CTGCTCAGGC GAACTCATGG AAGCCTTTAT GGAGTCCGGC ATCGATTACA CCATTTTCTT TTATAACCCC AACATTCACC CACTCAAAGA ATACGAACTG CGCAAACAGG AAAATATCCG TTTTGCGGAG AAAAACGGCG TGCCATTCAT TGACGCCGAT TACGACACTG ATGCTTGGTT CGCCCGCGCC AAGGGCATGG AGAACGAACC AGAACGCGGC ATCCGCTGCA CCATGTGTTT TGATATGCGC TTTGAACGCA CCGCGCTGTA CGCACACGAA CACGGCTTCC CTGTCATCAC CAGTTCTTTA GGGATCTCCC GTTGGAAGAA CATGGAGCAA ATTAACGACT GCGGGCATCG TGCCGCTGCG CCGTATCCCG GATTGGTCTA CTGGGATTAC AACTGGCGCA AAAACGGCGG CAGCCAACGC ATGATCGAAA TCAGCAAGCG AGAGCACTTC TACCAACAGG AGTATTGCGG CTGCGTCTAC TCACTGCGCG ACACCAACCA ACATCGCCGC ACACAGGGCC GGGAACGCAT CAAACTCGGC GTGCTGTACT ACGGCGACAC CCCTGAATCT GCAAACGCAA ACAGTACATC AGGTGTCACC CCAATGGAGA CAACGGAGAC AACGGAGACA ACGGAGACAA CGGAGACAAC GGATTAA
|
Protein sequence | MTSPIPTRQP LQLPQGQRLL LHSCCAPCSG ELMEAFMESG IDYTIFFYNP NIHPLKEYEL RKQENIRFAE KNGVPFIDAD YDTDAWFARA KGMENEPERG IRCTMCFDMR FERTALYAHE HGFPVITSSL GISRWKNMEQ INDCGHRAAA PYPGLVYWDY NWRKNGGSQR MIEISKREHF YQQEYCGCVY SLRDTNQHRR TQGRERIKLG VLYYGDTPES ANANSTSGVT PMETTETTET TETTETTD
|
| |