| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1465 |
|---|
| Symbol | |
|---|
| ID | 6121328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1534959 |
|---|
| End bp | 1537235 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641649458 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
|---|
| Protein accession | YP_001776014 |
|---|
| Protein GI | 170730581 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.93518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCG TGACCAACCT GGGCTTCCCG CGCATCGGCG CACGACGCGA ACTCAAGCGC
GCACTGGAAA GCCACTGGCG TGGCGAGACC GATGCCACAC AACTCCAACA CACTGCACGC
GAACTACGCG CACGGCACTG GCGACTACAA CGTGATGCGG GCGTGGATCT GCCACCCAGC
AACGACTTCA GCCTCTATGA CCACGTCCTA GATACCGCAT TCCTGTTCGA TGCCATTCCA
CAGCGCTACC ACGGCCTCGT AGATGCTGAT CCTCTGGCCG GTTACTTCGC GATGGCGCGT
GGCCGCCAAG CTGACAACAT TGATCTGCAT GCTCTGGAGA TGACCAAATG GTTCGATACC
AATTACCACT ACCTCGTCCC AGAACTGCAC CGTGACCAAC ACTTCGCGCT ACGCGGTAAC
AAACCCATCG CCGAGTTTGA AGAAGCACTG GCACTGGGCA TCACTACCAG ACCGGTGCTC
CTTGGACCAG TCAGCTTTCT CCTGCTGTCT AAGACAGTGG ATGGCAGCAA CCGGCTCGAC
CTACTGGAAC GTTTACTGCC GGTCTACACC CAATTGCTGC GCCAATTGCA GGAAAGCGGT
GCCGAATGGG TGCAAATTGA TGAGCCAACA CTTGTGCTGG ACCTGGATGC ACAAACACAG
CAAGCCTTCC GTAAAGCCTA CGCCACACTT AATCAAGGAC CACGCCCAAA ATTGCTGCTG
ACCAGCTACT TTGGTCCGCT CGGCGACAAC CTAGAACTGG CCTTGCAACT GCCTGCCGAT
GGCTTACACA TCGACTTAGT GCGTGGCACC GAACAGTTGG ATGCGGTCCT CAACACCTTG
CCCGCGGGAC GGGTACTCTC CGCCGGACTG GTGAATGGAC GCAATATCTG GCGTACCGCA
CTGGACAACG CACTGACACT GGCGCGCTAC GCGCAAGGCC GTGTTGATAA GGATCACTTA
TGGCTGGCAC CGTCATGCTC ACTCCTGCAC GTCCCTGTGG ACCTGGAACA AGAAAAAAAC
CTGGACGCCG ATGTACGCAA TTGGCTCGCA TTTGCCAAGC AAAAACTTAG CGAACTGCGC
GTACTGGCTG ACGCACTGGA CAACAAGCCA GAAGCAGAAA CAGCACTGAC CCAAACACGC
CAAGCATTGG AGGCACGGCG CCAATCACCC AAAGTCCACC GCCCCGACGT GGCACAGCGC
CTGGCCGCAC TCACACCGGA CACCACCCGG CGCAACACCG CCTACCCACA ACGCAGCCAG
GCACAACAAC ACACACTCAA CCTACCCGCT TACCCAACCA CCACCATTGG CTCCTTTCCA
CAGACGCTAG AAGTCCGTGA GGCCCGTGCG CAGTTCAAAT CCGGCAAGTT GTCCGAAAGC
GACTATGAGG CGTTTTTGAA AGCGGAAACC GAACGTTGCG TACGTACCCA GGAAGAGATC
GGGTTGGACG TCTTGGTCCA TGGCGAATTC GAGCGTAACG ACATGGTCGA ATACTTCGGG
GAGCAATTGG ACGGCTTCAT CTTCACCAAG CTCGGTTGGG TACAGAGTTA CGGATCACGC
TGTGTCAAAC CACCCATCAT TTATGGCGAT GTAGTACGTC CAGCACCGAT GACCGTCACC
TGGTCGGCTT ACGCACAATC ACTCACCGAC AAACCAATGA AAGGGATGCT CACCGGTCCG
GTGACAATGC TGCAATGGTC GTTTGTACGC GATGATCAGG AACGCGCGCA GACATGCCGG
CAGATCGCAC TGGCACTTCG CGACGAAGTC CAGGATTTAG AAAAAGCCGG AATCAAAGTG
ATTCAAATCG ACGAACCAGC CATCCGCGAA GGGCTACCGC TGCGCCGTGG TGAATGGGCA
GACTATCTGA ACTGGGCTGT GGAGAGCTTC CGCATTGCCT CTTCAAACGT CCACGACACT
ACACAGATTC ATACCCACAT GTGCTACTCG GAATTCAACG ACATCATTGA AGCCGTGGCT
GCATTGGATG CAGACGTGAT CTCGATTGAA ACATCCCGTT CACGCATGGA ATTACTGGAT
GCCTTCGTGA AATTCCGCTA TCCAAACGCC ATCGGCCCAG GGGTGTACGA TATTCACTCC
CCGCGTGTCC CACAGGAAGA GGAAATGGTG CTTCTATTGA AAAAAGCACG CGCAGTACTT
CCCCCGGAAC AATTGTGGGT CAACCCGGAT TGCGGCCTGA AGACGCGCGG CTGGAAAGAA
ACACGTGCTG CATTGCAAAC AATGGTGCAT GCCGCGCAGC GGCTACGTGC CGAATAA
|
|---|
| Protein sequence | MTIVTNLGFP RIGARRELKR ALESHWRGET DATQLQHTAR ELRARHWRLQ RDAGVDLPPS
NDFSLYDHVL DTAFLFDAIP QRYHGLVDAD PLAGYFAMAR GRQADNIDLH ALEMTKWFDT
NYHYLVPELH RDQHFALRGN KPIAEFEEAL ALGITTRPVL LGPVSFLLLS KTVDGSNRLD
LLERLLPVYT QLLRQLQESG AEWVQIDEPT LVLDLDAQTQ QAFRKAYATL NQGPRPKLLL
TSYFGPLGDN LELALQLPAD GLHIDLVRGT EQLDAVLNTL PAGRVLSAGL VNGRNIWRTA
LDNALTLARY AQGRVDKDHL WLAPSCSLLH VPVDLEQEKN LDADVRNWLA FAKQKLSELR
VLADALDNKP EAETALTQTR QALEARRQSP KVHRPDVAQR LAALTPDTTR RNTAYPQRSQ
AQQHTLNLPA YPTTTIGSFP QTLEVREARA QFKSGKLSES DYEAFLKAET ERCVRTQEEI
GLDVLVHGEF ERNDMVEYFG EQLDGFIFTK LGWVQSYGSR CVKPPIIYGD VVRPAPMTVT
WSAYAQSLTD KPMKGMLTGP VTMLQWSFVR DDQERAQTCR QIALALRDEV QDLEKAGIKV
IQIDEPAIRE GLPLRRGEWA DYLNWAVESF RIASSNVHDT TQIHTHMCYS EFNDIIEAVA
ALDADVISIE TSRSRMELLD AFVKFRYPNA IGPGVYDIHS PRVPQEEEMV LLLKKARAVL
PPEQLWVNPD CGLKTRGWKE TRAALQTMVH AAQRLRAE
|
|---|
| |