| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1460 |
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| Symbol | |
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| ID | 6121323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1529803 |
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| End bp | 1530630 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641649454 |
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| Product | glycerol uptake facilitator protein |
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| Protein accession | YP_001776010 |
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| Protein GI | 170730577 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.316645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGAA AGATGTTTGG CGAATTAATT TCCGAAGCAA TCGCAATGTT CATCATCATC
GCATTGGGCG AATCTGCGGC CGCAATGTAC ATCCTTTACG ACCCCAGTCC TTATCAAAAC
GCCTACTGGG GCCTGTGTAT CTGCTGGGGA TTGGCGGTGA CAATCGCCAT CTACGTCACC
GCTTCGGTTT CCGGAACCCA TGCCAATCCG GCCGTTACCT TGGCACTGGC GCTCTACCGC
GGCTTCCCTT GGAAAAAAGT ATTGCCGTAC TGGGCAGCAC AAGTCATCGG CGCCTTCATC
GGTGCAATGA TTGTGTACCA GCTCTATAGC CCTGTCATCG ACTACTACAA CCACATTCAC
CAACTCACCC GCGACGCTGG CGGGGCTGCT GGGGTGTTTT TCACTTCCAC AGGGATGGCA
ATCACCCCCA TACACGCACT CGGTGATGAA ATCATTCTGA CCGCATTCCT AATCTTCGGC
ATTTTCGCAA TCACCGAACG CTTCAACGAA GCAGCGCCCA CCGCCAACAG CGGCGCACTG
GTCATCGGAC TCCTCGTAGC AACCATCGGT GCCTGCATGG GCTACCTAGA AGGATGGGCC
ATCAACCCAG CACGCGATCT CGGCCCACGT CTGTTCGCCT TTCTGGCGGG CTGGGGTGAA
TCGGCATTCC CCGGAAAAGA TCACTACTGG TGGATTCCGA TTATCGGCCC CCTGATCGGC
GGCGTGATGG GTGCAACCGC ATTCCAATGC CTGATCTATC CATTCCTACC GGCACGGGTA
CAGGCCAAAC AACAAGCCGC GATACTGCTG CACAGGAAGC ATCCCTGA
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| Protein sequence | MNRKMFGELI SEAIAMFIII ALGESAAAMY ILYDPSPYQN AYWGLCICWG LAVTIAIYVT
ASVSGTHANP AVTLALALYR GFPWKKVLPY WAAQVIGAFI GAMIVYQLYS PVIDYYNHIH
QLTRDAGGAA GVFFTSTGMA ITPIHALGDE IILTAFLIFG IFAITERFNE AAPTANSGAL
VIGLLVATIG ACMGYLEGWA INPARDLGPR LFAFLAGWGE SAFPGKDHYW WIPIIGPLIG
GVMGATAFQC LIYPFLPARV QAKQQAAILL HRKHP
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