| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1456 |
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| Symbol | |
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| ID | 6121319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1525429 |
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| End bp | 1527390 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641649450 |
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| Product | oligopeptide transporter |
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| Protein accession | YP_001776006 |
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| Protein GI | 170730573 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG ATATTTCTCC CCGTCAACTT ACCTTCCGTG CTGTGGTGCT CGCGGTTGTG
TTGGCGGTTG TGCTGTCTGC GGCTAACGCG TATCTGGGGT TGTTTGCCGG TTTGACCATT
GCGACAGCAA TCCCGGCGGC GGTGGTATCG ATGGGGGTGC TGCGTGTATT GGGTGGCAGT
TCGATCTTGG AAAACAATAT TGTCCAGACC GGCGCTTCGG CTGGTTCGTC GGTTGCTGCT
GGTGTGATCT TCACTATTCC GGCGTTGGTC ATCATGGGGT ACTGGCCGGA CTTTAAATAC
TGGTGGGTGC TTGGTATTGC GGGTCTGGGT GGTTTGCTGG GTGTGCTGTT TTCGGTGCCA
TTACGGCGTT CGATGATTGT CGAGGAGCCG TTGCCGTTCC CTGAAGGCAA GGCCGCGGCC
GAGGTGTTGA AGGCGGGTGA GAATCCTGGG CCAGGGCTTA AAATTTTGGC GCTGTCTGGT
GGGATAGGTG CTTTAGTGAA GTTAGCTGCT GCCAGTGGTT TGAAGTTGAT TCCAGATACT
TGGTCGCAGG CGGCCTATCT GGGGAGCAGC AAGGTGGTGG GGTATATCGG TACCAATTTG
TCGCCGGCAC TGCTGGGGGT TGGTTACATT GTGGGTCTGA ATGTGGGGAT TGTGGTGTTG
TCAGGTTCAA TTCTGTCCTG GCATGTGGCC ATTCCGCTCT ATCAGCAGTT TTTCATGGGG
AGTGATCCGG AGTTGGCACA GCGTCTGGCG ACGGTGACGG CTGCCGAAGC GGCGTTTAGT
GTCTGGGGGG AAAAGATCCG TTATCTCGGT GTGGGTACGA TGCTGGTTGG CGGTGTATGG
ACGCTGTTTT CACTGCGTAA GTCGTTGCTG AGGGGGATTA AAAGCGGTTT TGCTGCGGCG
CGTAAGGGGG GCGGTCAGGT GGTGTCGCAT ACCGAGCGCG ATTTGCCGAT GACGTGGATG
TTGGTGGCGC TGGCGGTGTT TACGTTGCCG TTGCTGCTGT TGTATCAGTC GATCGTGCAG
CAATGGCAGG TGTCGGTGCC GATGACGATG ATTATGATCG TGGCTGGTTT TTTGTTTGTG
TCGGTATCGG GATATTTGGC TGGCATGGTG GGTTCTTCTA ATAATCCAGT GTCTGGTATC
ACGATTTCTA CGATCTTGTT TGCTTCAGCG GTATTGGTCT TGCTTCTGGG CCGCAATGGG
TTGGTGCCGA TCGGGAGTGG TGGTGCGCCG TTGGGTGCCG TAGCTGCGAT TATGATTGGT
GCGGTGGTCT GCTGTGCGGC AGCGGTGGGC GGGGATAATT TGCAGGATCT CAAGGCAGGT
TATTTGGTGG GTGCTACGCC GTGGAAGCAA CAGGTGATGA TGGGGATTGG CACGTTCTCG
TGTGCTCTGA TCATGGCACC GGTGCTGAAT TTGTTGGCAC ATGCGTATGG GATTGGTCCA
GCGACACCGC AGCATCCGAA TGCGCTGAGT GCTCCGCAGG CAACGTTGAT GGCGTCGGTG
GCGCGTGGTC TGTTTGGCGG CCAGTTGCCA TGGACGATGA TTGGGGCGGG TGTGTTGATT
GGCGCTTTCA TCATTGGGAT TGATGAGTGG CTCAAGGTGC GTGGTGCACG TTTCCGTGTT
CCGGTGCTGG CTGCAGCGAT TGGTATCTAT TTGCCGTTGG AGTTGATGGT GCCGATTTTC
TTGGGGGGCG TGTTGTCATA TGGTGTGGAG CGTGCTCACA AGGTGCGTCG CGGTGATGAG
GCTGAGCGTG ACCGTTTGCA TCGTCCCGGC GTGCTGTTTT CTGCGGGTTT GATTACAGGG
GAGGCACTGA TGGGGATTTT GATTGCAGTA CCAATCGTAA TTTCTGGTCA TCCTGATGTG
CTGGCATTAC CTGAGGCTTT CCAGTGCAAT CAGTGGTTTG GGTTGGCGAT ATTGGCGTTT
GTGGGATGGC TGTTGTATCG GGTGAGTAAG CGTCGTGTGT AG
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| Protein sequence | MNNDISPRQL TFRAVVLAVV LAVVLSAANA YLGLFAGLTI ATAIPAAVVS MGVLRVLGGS
SILENNIVQT GASAGSSVAA GVIFTIPALV IMGYWPDFKY WWVLGIAGLG GLLGVLFSVP
LRRSMIVEEP LPFPEGKAAA EVLKAGENPG PGLKILALSG GIGALVKLAA ASGLKLIPDT
WSQAAYLGSS KVVGYIGTNL SPALLGVGYI VGLNVGIVVL SGSILSWHVA IPLYQQFFMG
SDPELAQRLA TVTAAEAAFS VWGEKIRYLG VGTMLVGGVW TLFSLRKSLL RGIKSGFAAA
RKGGGQVVSH TERDLPMTWM LVALAVFTLP LLLLYQSIVQ QWQVSVPMTM IMIVAGFLFV
SVSGYLAGMV GSSNNPVSGI TISTILFASA VLVLLLGRNG LVPIGSGGAP LGAVAAIMIG
AVVCCAAAVG GDNLQDLKAG YLVGATPWKQ QVMMGIGTFS CALIMAPVLN LLAHAYGIGP
ATPQHPNALS APQATLMASV ARGLFGGQLP WTMIGAGVLI GAFIIGIDEW LKVRGARFRV
PVLAAAIGIY LPLELMVPIF LGGVLSYGVE RAHKVRRGDE AERDRLHRPG VLFSAGLITG
EALMGILIAV PIVISGHPDV LALPEAFQCN QWFGLAILAF VGWLLYRVSK RRV
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