Gene Xfasm12_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1442 
Symbol 
ID6121305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1507569 
End bp1508363 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID641649439 
ProductSignal peptidase I 
Protein accessionYP_001775995 
Protein GI170730562 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGT TTGAAATCAT CTTAGTAGTA CTGACTCTAG GAACAGGCAT CATCTCATTG 
CTGGACAAGC TATTTCTGGC TAAACGCAGG GCCGCACGCG CCGGCTTGCT TGACACCGAA
CCGCCGATCA TTGACTACTG CCGTTCATTT TTTCCAGTAC TAGCGGCCGT GCTCATCCTG
CGCAGCTTCA TCGCAGAGCC TTACAAAATT CCCTCAAGCT CAATGATGCC GAACTTGCTG
ATCGGCGACT TCATTTTGGT CAATAAATTT GCCTATGGCC TGCGCTTGCC AATCACCAAC
ACCAAAATCA TTCCAATCGG CAAACCGAAC CGTGGCGACG TGGCCGTATT CAAACCACCA
CATAAACCTG ACGAGAATTG GATCAAACGC GTCATTGGTC TACCAGGAGA TCGCATCGGG
TTCCATGGCG ACACCCTGTA CATCAACGGC GAACCCGTTA AATACATATT AAAAGGCCAA
TACACCGGCA AAAATGCTGG CGTACCGGAT CCGACCCTAC TCGTCGAAGA GCTACCAAAC
CATCCACACA CCATCCTGGA ATCAATCGGT CGTGGCCGTG AAGAAGGAGA AGGCGAGTGG
GTCGTTCCTC CGGGCCAGTA CTTTGTGATG GGTGACAATC GTGACAACAG CGAGGACAGC
AGATTTTGGA TAAAAACACA TTTTCTTCCA GAACAGAACC TGCGCGGCAA AGCCTTCCTG
ATTTGGCTCA ACTGCGAAAA CTGGCTCTGC AAGGGAAGCT TTGATCCATC AAGAATCGGA
ACCGTCATTC GTTGA
 
Protein sequence
MKWFEIILVV LTLGTGIISL LDKLFLAKRR AARAGLLDTE PPIIDYCRSF FPVLAAVLIL 
RSFIAEPYKI PSSSMMPNLL IGDFILVNKF AYGLRLPITN TKIIPIGKPN RGDVAVFKPP
HKPDENWIKR VIGLPGDRIG FHGDTLYING EPVKYILKGQ YTGKNAGVPD PTLLVEELPN
HPHTILESIG RGREEGEGEW VVPPGQYFVM GDNRDNSEDS RFWIKTHFLP EQNLRGKAFL
IWLNCENWLC KGSFDPSRIG TVIR