| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1439 |
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| Symbol | |
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| ID | 6121302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1503103 |
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| End bp | 1503828 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649436 |
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| Product | hypothetical protein |
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| Protein accession | YP_001775992 |
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| Protein GI | 170730559 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3073] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.481629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACC ATCTGTCCGA AACTGCTGAC AAGTTCGAAC TGCACACCCG ACTGCAATTG
TCCCAACTGA TTGATAGTGA ACTACCGATG GACGAAGCAC GCTTTCTTCT ACGTCGGTTG
CAACACAATG AAGAATTAGC CAACTGCCAG GAACGTTGGC AACTGTATGG TGACGTGCTG
CGTGGCGTTG CACTGGCTCC CGCCCCAACA GACTTTACGC TACGGGTACA AGCTGCAGTG
GCGGCGGAAG CAACACCTGT ACGCACTAAA CACCGCTGGC GCGGTGGGGC CGCGTTAATC
GCCTCCGTTG CCGCAATCAT CTTACTAACA CTACACGGGT GGCCAACGAT GGCACCGCCG
TTAACAGAAA CAGAAATGGT ATTTGCAACC ACCGCACAAC TACTTAAGCC TCCTGTATCG
CCAAAGATTG CTGCAATCTC CGAGTTGCAA CACGGAGACG TTGGCATAAC ACAACGGGGC
AAAACGACAC ACAACCAACA GGCTGCACCA GAACATACAC TCGCTACGAT TCCGGCAACA
CAAGGCCCAG CTCGTCTGAA CCTATTCACA CATTACGACA CGATACAAAC CAAACCCTGG
CCGCGTGCTG TTCTCTCTGC TCAGGCACCG TTTAACGCAA ACCTGCCGGA CACCGCTGTA
CGTCATGCCT TCTATCCATT CGAACCACCA CTCCCAAAAT CGCAACCTAT GTCCTCACAG
GAGTAA
|
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| Protein sequence | MSNHLSETAD KFELHTRLQL SQLIDSELPM DEARFLLRRL QHNEELANCQ ERWQLYGDVL
RGVALAPAPT DFTLRVQAAV AAEATPVRTK HRWRGGAALI ASVAAIILLT LHGWPTMAPP
LTETEMVFAT TAQLLKPPVS PKIAAISELQ HGDVGITQRG KTTHNQQAAP EHTLATIPAT
QGPARLNLFT HYDTIQTKPW PRAVLSAQAP FNANLPDTAV RHAFYPFEPP LPKSQPMSSQ
E
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