Gene Xfasm12_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1435 
Symbol 
ID6121298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1495436 
End bp1497820 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content58% 
IMG OID641649432 
Productbifunctional penicillin-binding protein 1C precursor 
Protein accessionYP_001775988 
Protein GI170730555 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC 
TIGRFAM ID[TIGR02073] penicillin-binding protein 1C 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.443847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGTGC TTCCATCATT GTCGGCCTCC ATGTTTGGTC GTTTGCGCGA TGATCGTCCA 
TTGACTTGGC TGCGCTGGAG TTGTGCTGGA CTGCTTTCGC TGCTTCTTCT GTTGGATGTG
CTTTGCCCAT TGCCATTACC GACCTCGCAC GATATGGCTT TGCTGGTGGT TGCTCGAGAT
GGTACTCCAC TGCGTGCCTT CCCTGATGCT GATGGTGTAT GGCGCTACCC GGCGCAGTTG
GGACAGGTGT CGCCGTTGTA TGTGCAGGCT CTGTTGACCT ATGAGGACCG TATGTTCTGG
CGCCATCCGG GGGTGAATCC TTGGGCGTTG TTACGTGCTG GGGGCCTGTG GCTGCGTTAT
GGTCATGTCG TTTCCGGTGG CTCGACGTTG ACAATGCAGG CGGCACGGAT TCTTGAGCCG
CATGGCCGTA CTCCTTGGGG CAAACTCAAG CAGTTGTTGC GTGCAGTACA GTTAGAAGTC
CATTTGAGTA AGCGCCAGAT TTTGCAGTTG TATTTGGAAC GTGCCCCTTA CGGAGGGACG
ATCCAGGGCG TTGAGGCGGC AAGCTGGGCT TATCTTGGCA AGTCGGCGGC ACGCTTATCG
CATGCTGAGG CGGCGTTGCT GGCGGTATTG CCGCAGTCGC CAAGCCGGTT GCGTCCGGAC
CGTAATCCGC AGTTGGCACG GCAAGCACGC GATAAGGTGC TGGCACGCAT GGCAGTGCTT
GGGGTCTGGT CCTCTGAAGA GGTGAAAGAT GCTCGGCTGG AGCCGGTGGT TGCGCGTGCA
TTGCAGCCAC CCATGTACGC GGCGTTGTTG GCGCAGCGTC TGCGTGTGCA ACGGCCACAT
GCTGCACGCA TTGTGACCAC GTTGGACATT GATTTGCAGC GTACTCTTGA GGAAAGAGTG
AGTACCTATT TCTCACCGTT ACCTGAGCGC ACTTCTGCTG CGGTGCTGGT GATGGATAAT
CAAAGCCTGG AAGCACGTGC CTACGTTGGT TCGGTGACAT TCGGTGATGC CAAGCGGTTG
GGTCACGTGG ATATGGTGCG GGCTTGGCGT TCGCCGGGTT CCACACTTAA ACCGTTTCTT
TATGGAATGG CGTTGGATCA GGGCTTGATT CATTCTGAGA GTCTGTTGGT CGATGCGCCA
CAGCATTTTG GTGATTATCG TCCGGGTAAT TTCGATGCTG CGTTCACTGG CCCTATTGGT
GCGTCCAGTG CATTGCGACA GTCGTTGAAC GTGCCTGCAG TCGATTTGTT GGAACGGATT
GGGCCGGCTC GGTTTGCGAC GCGTCTGGCG CATGCAGGGG TGCAGTTGCG TTTTCCACGC
GGTGCCACCC CGAATTTGGC GTTGATCCTC GGGGGCGCAG GGGCACAGTT GCAGGAGCTG
GTGGGTGCCT TCTCGGTGTT CAACCGCGGT GGCGTGGCAG GACGGGTGCG TTATACCCCG
GAGGATCCGC GTATTGAGCG TCGTTTGATC TCCCCTGGTG CGGCTTGGAT TGTGCGCGAG
ATTCTTGCTG CTAACCCGCG CCCTGGGTAT GGCAGGGGCA CGTTCGATAC TGCGATGCGT
CCGTCCGTGG CTTGGAAGAC TGGTACCAGC TATGGTTTCC GTGATGCTTG GGCGCTGGGG
AGTACCCGCC GCTACACAGT GGGTGTTTGG GTTGGGCGTC CGGATGGTAC CCCGCTGCCA
GGTCAGTATG GTGCGATTAC CGCATTACCG TTGTTGTTTG ATGTGATTGA TGCGTTGCCA
CGCGCGCCTG GTGATGCTGT GCCGGAGCCG ATGCCAGCCA GCGTGGAGCA GGTTGATATC
TGTTGGCCGC TGGGTTTTGC TGCTGCTAGC ACGCTGCCGG AATTGTGCCG ACGGCACTAT
AGTGCCTACG TATTGGATGG TGTGGTGCCG CCGACCTTCG CTGAGCGTGA TGCGAAATTG
TGGCGTAGCG GTTTGGAACG ATTCCAGGTC GATGTGCGTA GTGGTTTGCG TGTTAGGCCT
GATTGTCGTC TGCCGCATCT GATCAGGGAG CAGCAGATTG CACGTTGGCC GACGTTGGTG
ATCCCATGGC TTGATGCTGT GGAGCGTCGT GCGACGCATC TGCCTCGGCT GGCCTCAGAC
TGTTCTGAGG ATGATCGTGC TGATGCCGGG GTGCTGTACA TCGATGGTCT CGTTGAAGGC
GCCACATTGC AGCGTCCACC TGGTAGTACC AAGCCGGTAC ATCTGCAGTT GCGTGCCTTG
GGGAGTGAAA CACGGATCGA CTGGCTCTTG GATGGGCGCT GGATTGCTCA AACTGTGGGG
GGACAGACCT TTCAGCGTGA TTTCCCAGAA CCAGGGACGT ATATCTTGAC TGCGTTGGCT
GAGGATGGTG CTTGGAACAG GATGCAGTTC CGCGTTTTAC GTTAA
 
Protein sequence
MFVLPSLSAS MFGRLRDDRP LTWLRWSCAG LLSLLLLLDV LCPLPLPTSH DMALLVVARD 
GTPLRAFPDA DGVWRYPAQL GQVSPLYVQA LLTYEDRMFW RHPGVNPWAL LRAGGLWLRY
GHVVSGGSTL TMQAARILEP HGRTPWGKLK QLLRAVQLEV HLSKRQILQL YLERAPYGGT
IQGVEAASWA YLGKSAARLS HAEAALLAVL PQSPSRLRPD RNPQLARQAR DKVLARMAVL
GVWSSEEVKD ARLEPVVARA LQPPMYAALL AQRLRVQRPH AARIVTTLDI DLQRTLEERV
STYFSPLPER TSAAVLVMDN QSLEARAYVG SVTFGDAKRL GHVDMVRAWR SPGSTLKPFL
YGMALDQGLI HSESLLVDAP QHFGDYRPGN FDAAFTGPIG ASSALRQSLN VPAVDLLERI
GPARFATRLA HAGVQLRFPR GATPNLALIL GGAGAQLQEL VGAFSVFNRG GVAGRVRYTP
EDPRIERRLI SPGAAWIVRE ILAANPRPGY GRGTFDTAMR PSVAWKTGTS YGFRDAWALG
STRRYTVGVW VGRPDGTPLP GQYGAITALP LLFDVIDALP RAPGDAVPEP MPASVEQVDI
CWPLGFAAAS TLPELCRRHY SAYVLDGVVP PTFAERDAKL WRSGLERFQV DVRSGLRVRP
DCRLPHLIRE QQIARWPTLV IPWLDAVERR ATHLPRLASD CSEDDRADAG VLYIDGLVEG
ATLQRPPGST KPVHLQLRAL GSETRIDWLL DGRWIAQTVG GQTFQRDFPE PGTYILTALA
EDGAWNRMQF RVLR