| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1434 |
|---|
| Symbol | |
|---|
| ID | 6121297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1494677 |
|---|
| End bp | 1495159 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641649431 |
|---|
| Product | low molecular weight heat shock protein |
|---|
| Protein accession | YP_001775987 |
|---|
| Protein GI | 170730554 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTG TTCGTTATAC CCCTTGGCCT GGTCAGGCTG CGTTGCAGAA TGAGATTAAA
CAGGTGTTCG ACCGTTTTTT CGAACATAAC GGTGATACCG ATGAGTCTGC AGTGGTGACC
GCGCAGTGGG TGCCGCGCGT GGATATTAAG GAAGAACCTA ACCAGTTTGT GTTGTATGCC
GATTTGCCTG GGATCGATCC AGCTGACATT GAGGTGCAAA TGGATAAGGG CATTCTTTCC
ATTAAAGGTG AGCGCAAAAC CGAGTCGTCT AGTCAAACAG AACATTTCTC GCGCATTGAG
CGTCGTTATG GCAGTTTCCA TCGTCGCTTT GCATTGCCAG ACAGTGCCGA TGCTGATGGC
ATTACGGCTA GTGGTAGTCA TGGTGTGTTG AGGATCTTGA TCCCGAAACA AGCGGCGACG
ACACCACGGC GTATTCAGGT TGGTAACGCT GTTTCCAGCG ATGTTGCGTT GCAATCAATG
TGA
|
|---|
| Protein sequence | MNVVRYTPWP GQAALQNEIK QVFDRFFEHN GDTDESAVVT AQWVPRVDIK EEPNQFVLYA
DLPGIDPADI EVQMDKGILS IKGERKTESS SQTEHFSRIE RRYGSFHRRF ALPDSADADG
ITASGSHGVL RILIPKQAAT TPRRIQVGNA VSSDVALQSM
|
|---|
| |