| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1410 |
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| Symbol | |
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| ID | 6121273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1469020 |
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| End bp | 1469676 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649407 |
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| Product | methylthioribulose-1-phosphate dehydratase |
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| Protein accession | YP_001775963 |
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| Protein GI | 170730530 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.238632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCA CTTCCACACC ATCCCTGCCC TACGACACGA ACCGTCTGCG CGAATTGGCG
CATCTGTTGA TCGGCACGAT CAGCGAATTC GCTCAAGCAG GCTGGACACC AGCCACAAGT
AGCAATTTCT CGCACCGTCT GGATGAACAT CATGTGGCTA TCACCGTCTC CGGCCGCGAT
AAACGATGCT TGAGGGAAGA GGACATTATC GCCGTCGACT TGGACGGCAA CGCCGTTGGA
CATCCACATA CTCCCTCGGC AGAGACGTTG TTACATACCC AACTGTACCG GCGCTTTCCT
GAGATTGGCT GCGTATTGCA TACCCACTCG CTAACACAAA CGGTAGCCTC ACGGGTGTAC
GCCGGGGCCG GTCACATTTC TCTGAAAGAT TACGAGCTAC TCAAGGCCTT TGAGGGGCAC
AGCACCCACG AAACAACCTT GGATGTTCCC GTCTTCTGCA ACACTCAAAA TATGAATATT
CTTGCTGCCC AGGTTGACAC ACTCCTGGAC AAACAACGGA TGTGGGGATA TCTGATCAAC
GGGCACGGAA TGTATACCTG GGGCAACACG CTCGCCGATG CGCGCCGCCA CCTTGAGGCA
TTGGAATTTC TGCTGCACTG CGAACTGGAC CTACTGAAAT TACGTGGCTA TCTTTGA
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| Protein sequence | MNATSTPSLP YDTNRLRELA HLLIGTISEF AQAGWTPATS SNFSHRLDEH HVAITVSGRD
KRCLREEDII AVDLDGNAVG HPHTPSAETL LHTQLYRRFP EIGCVLHTHS LTQTVASRVY
AGAGHISLKD YELLKAFEGH STHETTLDVP VFCNTQNMNI LAAQVDTLLD KQRMWGYLIN
GHGMYTWGNT LADARRHLEA LEFLLHCELD LLKLRGYL
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