| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1409 |
|---|
| Symbol | |
|---|
| ID | 6121272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1467621 |
|---|
| End bp | 1469015 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641649406 |
|---|
| Product | cationic amino acid transporter |
|---|
| Protein accession | YP_001775962 |
|---|
| Protein GI | 170730529 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.173334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAC AGCTCTGGGC CACCAAACTC TCTCAACCCA GCCAGGACAG TGCCGAAGGA
CTCAGCCTGC AACGCGTCCT TGGAGTGTGG GGGTTAACTG CACTGGGTAT CGGTGCGGTG
ATTGGCGGCG GCATCTTCGT CATTACCGGG CAAGCCGCGG CCAATCACGC CGGACCAGCC
ATTATGCTGT CGTTCGCACT CGCGGCGATC TGCTGTACGT TCTGTGCGCT GGCGTATGCC
GAATTCGCGG CGATGGTGCC GGTCTCTGGA AGCGCCTACA CCTATACCTA TGCCACTTTC
GGTGAGCTGG CAGCCTGGTT CATCGGTTGG ATGCTGGTAT TGGAATATGG GGTTTCTGCC
GCGGCGGTGG CGGTGAGCTG GAGCGGCTAT TTCCTCAGCT TGTTACAGCA TCTGGGCATC
CATCTGTCCG CCGCACTAGT GAATGCACCA TTGGACGGCA CGCTGCACGC CACTGGAGCC
ATTGCCAATC TGCCGGCAGC CACCATCGTG CTGCTGCTGA CTTGGTTGTG CTACTTCGGC
ATCCGTAAGT CCTCGAAGAT CAATATCGCA ATGGTTGCAC TCAAAAGTGG GCTGATCTTG
CTGATTATTG GCGTCGGCTG GAAATACGTG AACCCTGATT ACTGGCAACC GTTCATCCCG
ACCAATCAAG GGCCGGGCAA ATACGGATGG AATGGTGTGT TACATGGCGC GTCAATGGTG
TTTTTCGCCT ACATCGGTTT TGAAGCGGTG TCGGTGGCCG CGCAGGAATC GCACCGTCCA
CAGCGCGACC TTCCTATCAG CATGATGGCC GCCGTCATGA CTGGATTGGT CCCTTACACG
CAACTGGGCA CAGACGAGCC AGTCGTCACC GCAGTCGCCG CACACCCCCA ACTGGGCTGG
CTGCGCGTCG TGGTCGAAAT CGGTGCATTG GTCGGACTGT CTTCGGTCGT GTTGGTGATG
CTCATCGGAC AACCGCGCAT CTTTATGATC ATGGCCGGTG ATGGCCTGCT GCCACCGATA
TTCAGCACAA TCCACTCCAA GCACCGCACT CCGCACATCA ACACGGTGAT CACCGGACTA
GGTATTGCGT TGCTCGCAGC GGTGTTCCCA CTGGATGTAC TCGGCGAACT CACCTCAATG
GGGACGTTGA TTGCCTTTAC CGCCGTCTGT GCCGGCGTGC TGATTCTGCG CTGTACTCGG
CCAGATCTGC CACGCCCATT CCGAATGCCG GCAGCATGGT TGTTTTGCTC CGCTGGTGTA
CTCAGTTGCA TTACCTTATT GTCAGCAATG ACCAGGCACA ATTGGATGCT GATGAGCGTG
TGGACTGTTC TTGGTTTTTC CCTGTACTTC AGCTACGGAT ATCGCCACAG CAAACTGCAT
CGAGAAAGCA CCTGA
|
|---|
| Protein sequence | MFKQLWATKL SQPSQDSAEG LSLQRVLGVW GLTALGIGAV IGGGIFVITG QAAANHAGPA
IMLSFALAAI CCTFCALAYA EFAAMVPVSG SAYTYTYATF GELAAWFIGW MLVLEYGVSA
AAVAVSWSGY FLSLLQHLGI HLSAALVNAP LDGTLHATGA IANLPAATIV LLLTWLCYFG
IRKSSKINIA MVALKSGLIL LIIGVGWKYV NPDYWQPFIP TNQGPGKYGW NGVLHGASMV
FFAYIGFEAV SVAAQESHRP QRDLPISMMA AVMTGLVPYT QLGTDEPVVT AVAAHPQLGW
LRVVVEIGAL VGLSSVVLVM LIGQPRIFMI MAGDGLLPPI FSTIHSKHRT PHINTVITGL
GIALLAAVFP LDVLGELTSM GTLIAFTAVC AGVLILRCTR PDLPRPFRMP AAWLFCSAGV
LSCITLLSAM TRHNWMLMSV WTVLGFSLYF SYGYRHSKLH REST
|
|---|
| |