| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1407 |
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| Symbol | |
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| ID | 6121270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1464461 |
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| End bp | 1465702 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649404 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001775960 |
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| Protein GI | 170730527 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.405742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCGA CGAAAACTTC TTTTCCCAAA CAAGACATCC GAATTTTGCT GCTGGAAGGG
GTCAGTCACA GCGGGATCGA AACGTTCCGC GCGGCGGGTT ACTCGCAGAT CAAGATCCAT
ACGACATCGC TGCCGGAAGA GGCACTGCAA GCAGAGATTG CGGAAGCGCA CATCATCGGT
ATTCGCTCTC GCACTCAATT GAATGCAGCG GTGCTAGGGC ATGCCAAACG TCTGATGGCC
ATAGGTTGTT TCTGCATCGG GACGAATCAG GTGGACTTGG ATACGGCGGA ACTGAGCGGG
ATCCCGGTGT TCAACGCGCC ATATTCCAAT ACGCGTAGTG TGGCTGAGCT GATCATTGCA
GAAGCAATTT TTTTGCTACG CAAGATCCCG CAGAAAAATG CCGAATGCCA TCGTGGGGGC
TGGTCCAAAT CTGCCATCAA CAGTCATGAA GCACGCGGTA AGGTGTTGGG CATCGTGGGA
TACGGTCACA TCGGTACGCA AGTCAGTGTG CTGGCGGAGG CGATGGGGAT GCAGGTGATT
TTCTACGATA TTGAATCCAA GCTCTCTTTG GGCAATGCGC GTCCAGCAGC AAGCTTGGAT
GAGTTGCTCG GCATTGCCGA CGTGGTGACG CTGCATGTAC CGGAAACGGC AGCGACCAAG
AATATGCTTG GTCATGCAGA ATTGGCGCGA ATGAAACCGG GGGCGCATTT GATTAATGCA
TCGCGCGGTA CGGTTGTGGA GATTGACGCG CTGGATGCGG CTCTGGTGTC GGGGCATCTG
GGCGGGGCGG CAGTGGATGT ATTCCCAAGC GAACCCAAGG GCAATAGTGA TCCGTTCATC
TCACCATTGA GCAGACACGA CAATGTGATT TTGACGCCAC ATATTGGGGG CAGCACGCTA
GAAGCGCAGG ACAATATTGG GATTGAAGTG GCAGCCAAAT TGATCCGTTA TAGCGATAAC
GGCAGCACGC TATCGGCCGT GAATTTCCCT GAAGTCAGTT TGCCGGAGCA CGTGGGGAGT
ATGCGTTTGC TGCATATCCA CCGTAATGTG CCCGGGGTGC TGTCGCATAT CAACGAGCTG
TTCTCGCGTC ACAACGTCAA TATTGATGGT CAGTTCCTGC GTACCGATGC CACGTTGGGC
TATGTGGTCA TCGATATCGG TGCCAGTCAG ACGCAGGCTC TGGCATTAAA AGAGGCATTG
ACGCAGGTTC CCGGGACGCT GCGTACCCGT CTGCTGTACT GA
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| Protein sequence | MPPTKTSFPK QDIRILLLEG VSHSGIETFR AAGYSQIKIH TTSLPEEALQ AEIAEAHIIG
IRSRTQLNAA VLGHAKRLMA IGCFCIGTNQ VDLDTAELSG IPVFNAPYSN TRSVAELIIA
EAIFLLRKIP QKNAECHRGG WSKSAINSHE ARGKVLGIVG YGHIGTQVSV LAEAMGMQVI
FYDIESKLSL GNARPAASLD ELLGIADVVT LHVPETAATK NMLGHAELAR MKPGAHLINA
SRGTVVEIDA LDAALVSGHL GGAAVDVFPS EPKGNSDPFI SPLSRHDNVI LTPHIGGSTL
EAQDNIGIEV AAKLIRYSDN GSTLSAVNFP EVSLPEHVGS MRLLHIHRNV PGVLSHINEL
FSRHNVNIDG QFLRTDATLG YVVIDIGASQ TQALALKEAL TQVPGTLRTR LLY
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