| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1406 |
|---|
| Symbol | |
|---|
| ID | 6119927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1462870 |
|---|
| End bp | 1464258 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641649403 |
|---|
| Product | oxidoreductase |
|---|
| Protein accession | YP_001775959 |
|---|
| Protein GI | 170730526 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.129812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACT CCCGCCTCAC ATCCTTGCAT CAAACCCTTC CAACGTTGCG TCTCAAGACC
GAACCTGCTG ACTTACAGCA CTATGGCCGC GACTGGACCC GGCGCTTCAC ACCGGCACCC
TTAGCAATCG CACTTCCTGC CACTGTCCAA GAAGTCCAGG CCATTGTGCG TTGGGCCAAT
GATGCCCACA TTGCGATCGT CCCTTCCGGC GGGCGCACCG GCCTATCCGG CGGTGCCATG
GCCACCAATG GCGAACTGGT GCTCAGTCTG GAGCGGATGA ACAAAATGCT CCGGTTCGAC
CCCATGGATC GCACCATGAC CGTGCAAGCT GGCATGCCAT TAGAGGCCGT CCAAGCCGCC
GCCCGCCAAC ACGGCCTCCT GTATCCCGTC GACTTTGCCG CCCGAGGCTC ATGCTCCATT
GGCGGCACAA TTGCGACCAA TGCAGGAGGA ATCCGCGTGG TCCGTTACGG CAACACCCGC
GAATGGATCG CTGGCCTCAA CGTAGTGACT GGGACTGGCG AACTCCTCGA GTTGAATCAT
GCCCTGATCA AAAACTCCAG CGGCTATGAC TTTCGACATC TGATGATTGG TTCCGAAGGC
ACATTGGGCA TTGTCGTCGA AGCCACCTTG CGTCTGACCG ACCCACCGCC ACCGACCAAA
GTCATGCTGC TGGCATTGCC CACCTTTGAC GTCTTGATGC AAGTATTTGC CGCCTTTCGC
GCACAACTAC AGATTGAAGC CTTCGAATTT TTTACGCAGC GCGCATTGCC CCATGTTCTA
GCCCACGGCG CCCAAGCACC GTTTGAACAT CCCTATCCGT ACTACGTCGT CACCGAATTC
CCCTGCGCCG ACGCAGCCCA AGAAACCACC GCACTCACTG TCTTTGAAAC CTGCATGGAG
CAGGGCTGGG TCTTGGATGG TGTCATCAGC CAGAGCGACG CACAGGCAGC CCAACTATGG
CGATTGCGTG AGAGCATCAC CGAAAGCATT GCCCCATATA CCCCGTATAA AAACGATATT
GCCGTGCGCA TTGCCGCCAT GCCCGCATTT CTAGAACAAG CACAAGCATT ACTGAGCCAA
GCCTACCCAG AATTTGAAGT CCTCTGGTTC GGCCATATCG GTGACGGCAA CCTACACATT
AACGTCCTCA AACCGCACAC AGTGCCCCAG ACTGACTTCA TCCACACCTG CGAACACGTC
ACCGCACTGC TTGCTGACCT CCTACAACGT TTCCGCGGCA GCATCTCCGC AGAACATGGC
ATTGGCCTGA TAAAAAAGCC CTACCTTCAC AGCACCCGCA GCCTTGCTGA AATTGCATTA
ATGCGTCAAA TAAAACGCGT ATTCGACCCA AAATGGATAT TGAACCCAGG GAAAGTATTT
GACCCCTAA
|
|---|
| Protein sequence | MNDSRLTSLH QTLPTLRLKT EPADLQHYGR DWTRRFTPAP LAIALPATVQ EVQAIVRWAN
DAHIAIVPSG GRTGLSGGAM ATNGELVLSL ERMNKMLRFD PMDRTMTVQA GMPLEAVQAA
ARQHGLLYPV DFAARGSCSI GGTIATNAGG IRVVRYGNTR EWIAGLNVVT GTGELLELNH
ALIKNSSGYD FRHLMIGSEG TLGIVVEATL RLTDPPPPTK VMLLALPTFD VLMQVFAAFR
AQLQIEAFEF FTQRALPHVL AHGAQAPFEH PYPYYVVTEF PCADAAQETT ALTVFETCME
QGWVLDGVIS QSDAQAAQLW RLRESITESI APYTPYKNDI AVRIAAMPAF LEQAQALLSQ
AYPEFEVLWF GHIGDGNLHI NVLKPHTVPQ TDFIHTCEHV TALLADLLQR FRGSISAEHG
IGLIKKPYLH STRSLAEIAL MRQIKRVFDP KWILNPGKVF DP
|
|---|
| |