| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1402 |
|---|
| Symbol | prmA |
|---|
| ID | 6119923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1460455 |
|---|
| End bp | 1461375 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641649400 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_001775956 |
|---|
| Protein GI | 170730523 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000377664 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTTT TAGAGGTCAG TGTGCAGTGT CAGGAGAGGA GTCAGGCGCG CTATGAGGAG
GTATTGGAGA GTTTCGGTGC GTTGGCAGTG ACGTTGTTGG ATGCCGATGC GGATACGGTT
CGGGAGCGGG GGGTGTTTGA GCCGGGGGTG GGGGAAACGG TGTTGTGGGA TGTTGTGGTG
TTGAGTGCGT TGTTTCCGGT GGAAACGGAT GCGTTGGGGT TGTTGGCTGG GCTGGAGGGT
GCGGAGCCGG GGTTGGATTG GGGGGGGGTC CGTTTCCGTG TGGTGGTGGA TGAGGATTGG
GAGCGGGTGT GGATGGATCA GTTTCAACCG ATGCGTTTTG GGGAGCGTAC GTTCATTGTG
CCGTGGAATC AGGCGGTGCC TGTGGAGGCG TCGGGGATGG ATGCGGCGGT GGTGCGGTTG
GATCCGGGGT TGGCGTTTGG TTCGGGGACG CATCCAACAA CGGGATTGTG TCTGCGTTGG
CTGGATCGGC TGGGAGGGGA TGGGGTGTTA GGGGGGGGTG AGGTGCTCGA TTTTGGGTGT
GGTTCGGGCA TTTTGGCGCT GGCCGCTCTG AAGTTGGGGG CGGTTTATGC GGTGGGTGTG
GACAATGATC CGCAGGCGTT GTTGGCAAGT CGGGAGAATG CGCTGCGTAA TGGGGTGGCG
GAGCGGTTGG GGGTGTATCT GCCTGCGGAG GCGCCGGTAC GCAGGTATCC GGTGGTGGTG
GCCAATATTT TGGCGTCAAC GTTGGTGGCG TTGGCGGAGC GGTTGGCGGG GTATGTTGCG
CCGGGGGGAC GGTTGGCGCT GTCAGGGATT TTGCGGGGGG AGGAGGAGGA GGTGTTGCGC
TGTTATGCGG TGTGGTTGGA TGTGTTGGGT TGTGAGGAGG AGGATGGTTG GATACGGATT
GATGGGGTAC GCCGTTGTTG A
|
|---|
| Protein sequence | MAFLEVSVQC QERSQARYEE VLESFGALAV TLLDADADTV RERGVFEPGV GETVLWDVVV
LSALFPVETD ALGLLAGLEG AEPGLDWGGV RFRVVVDEDW ERVWMDQFQP MRFGERTFIV
PWNQAVPVEA SGMDAAVVRL DPGLAFGSGT HPTTGLCLRW LDRLGGDGVL GGGEVLDFGC
GSGILALAAL KLGAVYAVGV DNDPQALLAS RENALRNGVA ERLGVYLPAE APVRRYPVVV
ANILASTLVA LAERLAGYVA PGGRLALSGI LRGEEEEVLR CYAVWLDVLG CEEEDGWIRI
DGVRRC
|
|---|
| |