| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1378 |
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| Symbol | holA |
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| ID | 6119899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1435768 |
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| End bp | 1436799 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649381 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001775937 |
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| Protein GI | 170730504 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.212433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTC GCCCAGAGCA ACTCGCCAAC CTGCCTGCCA ATCAACCCTT AGAGCCTGCC
TACCTCATTG CCGGCCCCGA AACCCTACGC TTAGTCGAAG CTGCCGATGC GATACGTACC
CGTGCTCGTG CCGACGGCAT CACCGAACGC GAAATATTCG ACGTCGAAAG CCGTGACTTC
GACTGGCAAC AACTTGCCTC CAGCTTCAAC GCCCCCAGCC TCTTCAGCTC ACGTCGCTTA
ATCGAAATAC GCCTCCCAGG AGGTAAACCT GGTAAAGAAG GCAGTGAAGT CATCACAAGG
TTCTGCGCCA CCCCCTCATC AGATGTTATC TTGCTGATCA CATGCAACGA ATGGAGCAAA
GCACACCATG GCAAGTGGAC CGATGCCATC GCTCGCATCG GTAAAATCGC AATCGCCTGG
AGCATCAAGC CTCACGAACT ACCCGACTGG ATTACACGGC GCCTACATAG CAAAGGCTTA
CGTGCCAACA CGGATGTAAT ACACCAATTA AGCACACGCC TAGAAGGCAA CTTACTGGCC
GCCGCCCAAG AAATTGACAA ATTGGCGTTA TTGAATCAAG GCCCTCTCCT CGACCTGGAG
ACCATGGAAT CATTCGTTGC CGACACAGCG CGTTACGACG TATTCCGACT TACCGAAGCG
ATGCTCTCCG GCCAACCCAC CGCAACGATA CGTATGCTCG GCAAACTACG GGCCGAAGGT
GAAGCAGTGG CAGCACTGCT GCCCATTCTG ATCAAAGAAC TCATCCGTAC CACGACCCTG
TCATGGGCCA AACATGACAA CGGCAATCTA GCTGCCGAAA TGAAAGCCCA GGGAATCTGG
GAAACACGTC AAGCACCCTT CAAGCGCGCA TTACAACGTC ATACCTCACC GTACAAATGG
GAACACTTCG TTGCCGAAGT CGGGCGCATA GACCGCATCA CCAAAGGACG CAACGACGGC
AATGCCTGGC TGTCACTCGA ACGTCTCATG GTGGCAGTGG CAGAAGCAGA TGCAACACGT
CTGTTAGCAT AA
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| Protein sequence | MELRPEQLAN LPANQPLEPA YLIAGPETLR LVEAADAIRT RARADGITER EIFDVESRDF
DWQQLASSFN APSLFSSRRL IEIRLPGGKP GKEGSEVITR FCATPSSDVI LLITCNEWSK
AHHGKWTDAI ARIGKIAIAW SIKPHELPDW ITRRLHSKGL RANTDVIHQL STRLEGNLLA
AAQEIDKLAL LNQGPLLDLE TMESFVADTA RYDVFRLTEA MLSGQPTATI RMLGKLRAEG
EAVAALLPIL IKELIRTTTL SWAKHDNGNL AAEMKAQGIW ETRQAPFKRA LQRHTSPYKW
EHFVAEVGRI DRITKGRNDG NAWLSLERLM VAVAEADATR LLA
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