| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1370 |
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| Symbol | |
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| ID | 6119891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1426437 |
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| End bp | 1428509 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641649374 |
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| Product | hypothetical protein |
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| Protein accession | YP_001775930 |
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| Protein GI | 170730497 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACC AGATCATTGA TGCCCTTCAT CGTCAGGCAC ATTCCGAAGC ATTGAGCCTA
GCCCGCGCAT GGTGCGCCTC TGCACCTGGT GAGGCACAAG CTCAACGCTG GCTCGCGGCT
GCCCTGCAAC AATATGGCGA ACACAAAGCA GCACTTGCTG CCAGCGAAGC CGCACTGGCG
CTCGCACCAG AACTACCAGA ACTGCATCTA CAACACGGAC TCCTATTACT TGGACAACAC
GACCTATCTG GCGCCGACGC AGCACTCTCC CGCAGTACCC GCTTAGATCC AAACCAATTC
AATACTTATG TCATGCAAGC ACACTTGGCA ATCGCACGCG GCGCACTGGA CGAAGCCGAG
CAACTCAGCC GCACCGCCGC ACGCATCATT TCGGATCATC CGCAACTGCT GGCCGTGAAC
GCCACCATCG CACTGCGTCG CGGACAAGTG GACCAGGCAC TGGCCATGCT CTCGCAAGCC
GTCGAACTGC TTCCTGAGGA ACCAGCCGTC TTATTCTCCC TTGGCTTCGC CTATCTCCAG
AAAGGACATA TTGCATTCGC CGAGCGCGCC TTCCAACGCG TTATCGAACT GAACCCTCAC
GTCATCCCAG TCCGCGCACT GATCGCCCAA CTTGCACAAC GCCAAGGCAG ACTCGATGAC
GCCCTCCGTA TCCTTGAAGA AGCCTTATCT TTAACTGAGG GCGACACACC AGCCCTACAC
CGACTCACCG GTGAATTTGA GCTACTGGCC GGAAACCCAG ATCGGGCATT GCCCCACCTA
CGTCAAGTAC TGGCAACCTG GCCAGAAGAT CCACGCACCC TGGAAGCACT CCTAACTGCC
TGGAAACAAT TAGATATGGA CGATGACGCC CGCGTCACCC TGGACGCAGC CTTAGACATC
AAACCGCGTA ACCATGATCT ATGGCTGGCA CGACTGGCCG TGGCCCCCGT CGGGAGCGAC
GAGGCACGCA TTGTCATCGA ACGTTGGCTA TCGGCCATGC CAGAACATCT TCCGGCACTA
GAAACACTGA TGAGCCTACA CGACATACAA AATAATCCTG AAGCCGCCGA AACCGTGGCA
CGGCAAATCG TGGCAATCGA ACCAGGTCGG CTCAGCGGTG AACAGCGCAT TGTGGAAGCA
CTACTACAAC GCGACCCACC AGCCGCAGTA ACCTGTTTGC AACAACTCAT TGAAAGCGTC
CCCGAACATG AACGCACCAT ACTCCGGCCT TGGCTCGGCC TCGTCCAAGA TCGTGCTGGC
CAGTTCGAAG CAGCCCTAGC AACCTGGCTG CAATTCCAAG CCGAGCAAGC CAAATATCGG
CTCCCACTCC CACCACAAAC CTGGACTAAC TCCAAACAAT GGCCCGATTT AGCAGCGATC
CCCGCCGAGA CATTGGCACG CCCACTGCTG ATATGGGGAC CTCCAGGCAG CCACGTCGAA
CGCGTCACCA TGATGATGGC CTGGGCCAGC AGCCTGCTGT GTGCTGACCG CTATAGCGAG
ACACCACCCG CAGATCCACT ACAACGCTAC GAAACAGTCT CCGAACTAAC ATCCGGCACA
TTAGCGCCAC AGGCCTTGAT TGATGCATGG CGGCAACAGC TCCGCGCACG CGGCATCGAA
AACGGCAACG TGATCGATTG GTTACTCTGG TGGGACAACA GCCTACTCAC AGCACTGCGT
CCCCACTTAC CCGAAGGCCG ACTCATCATT GTGCTACGGG ACCCACGCGA CATGCTGCTA
GATTGGATCG CCTACGGCTC ACCGATACCA CTGGCACTAG ACTCCCTACA ACACGCTGCA
AACTGGCTAG GAGACATCCT GAATCAAATC GCCACCCTGC ACGAACTTGA CCTGTATCCA
CACCACCTCA TCCGCCTGGA TGGCATTGAA GACAATCCAC AGGCATTGGC CACCACCCTG
GAAAACATCT TCGGCGACCC GTTTCCGATA CCCCCATCAT TGGAAGCACC ACGCCTGCCC
GCTGGCCGCT GGCGCGACTA CCGTGAAGTA CTCAGCAGCG CATTCGATGC TGTTCTCTTA
GCCGCCATGC GCCTGGGTTA TCCCTTTGAC TGA
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| Protein sequence | MQDQIIDALH RQAHSEALSL ARAWCASAPG EAQAQRWLAA ALQQYGEHKA ALAASEAALA
LAPELPELHL QHGLLLLGQH DLSGADAALS RSTRLDPNQF NTYVMQAHLA IARGALDEAE
QLSRTAARII SDHPQLLAVN ATIALRRGQV DQALAMLSQA VELLPEEPAV LFSLGFAYLQ
KGHIAFAERA FQRVIELNPH VIPVRALIAQ LAQRQGRLDD ALRILEEALS LTEGDTPALH
RLTGEFELLA GNPDRALPHL RQVLATWPED PRTLEALLTA WKQLDMDDDA RVTLDAALDI
KPRNHDLWLA RLAVAPVGSD EARIVIERWL SAMPEHLPAL ETLMSLHDIQ NNPEAAETVA
RQIVAIEPGR LSGEQRIVEA LLQRDPPAAV TCLQQLIESV PEHERTILRP WLGLVQDRAG
QFEAALATWL QFQAEQAKYR LPLPPQTWTN SKQWPDLAAI PAETLARPLL IWGPPGSHVE
RVTMMMAWAS SLLCADRYSE TPPADPLQRY ETVSELTSGT LAPQALIDAW RQQLRARGIE
NGNVIDWLLW WDNSLLTALR PHLPEGRLII VLRDPRDMLL DWIAYGSPIP LALDSLQHAA
NWLGDILNQI ATLHELDLYP HHLIRLDGIE DNPQALATTL ENIFGDPFPI PPSLEAPRLP
AGRWRDYREV LSSAFDAVLL AAMRLGYPFD
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