| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1368 |
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| Symbol | |
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| ID | 6119889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1423279 |
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| End bp | 1425597 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649372 |
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| Product | transcription-related protein |
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| Protein accession | YP_001775928 |
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| Protein GI | 170730495 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACA GCCTCCTCAC CCAGCATATT GCTCAGATCA TTGCCACTGA GATCTCCTCA
CAGCCCACCC AAGCCCGCGC AGCCATCGCC TTGCTTGATG AGGGCGCAAG CGTCCCCTTC
ATCGCACGCT ACCGTAAAGA AGCCACCGGC GGCCTGGATG ACACCCAATT ACGCACCCTC
GAAACCCGAT TAACCTACCT ACGCGAACTG GAAGAACGCC GCTCAGCCAT CCTCGCCAGC
ATCACCGAAC AAGGCAAACT GAACGACCTC ATACACGCCG AGATCCTCGC TGCCGACACC
AAATCGCGTT TGGAGGACCT CTATCTCACA TACAAACCCA AGCGCCGCAC CCGCGCACAG
ATCGCACGCG AAGCAGGCTT AGAACCATTA GCCGATAGCC TACTGACTGA CCCCACACTG
ATTCCAGAGA CCGTTGCCGC CAACTTTGTC GACCCTGAGA AAGGGATCAC CGACATCAAA
ACCGCACTTG AAGGCGCACG TGTAATCCTG ATAGAGCGCT GGGGAGAAGA TGCCGCTCTG
ATCGGTGAAC TACGTCAATG GCTCGCCAAC AATGGAGTGA TTCATGCACG CCTCATCGAC
AACAAAGAAG ACACTGGAGC CAAATACAGA GACTACTTCA ACCATACCGA ACTGCTCTCC
AAAATTCCCT CACACCGCCT GCTCGCATTG TTCCGCGCCC GCTCTGAAGA AATACTGCAT
TTAGACCTAG ATCCCGGTAA TGATGTTGAC GCTGGCCATC AATACTGTGA AAGCATGGTC
ATGCAGGCCA CATGTGTCGC TGACCAAGGG CGCCCAGCGG ATACATGGTT AATGACCGCC
TGCCGCCTCA CCTGGCGTGC CAAACTTCAT ATGCATTTGA TGTTGGACCT CTTCAACCAA
GCACGAGAAA AAGCCGAAGC AGAAGCAATC ACTGTATTCA GCAATAACCT CAAAGATCTC
CTGCTAGCCG CACCGGCTGG ACCACGCATC GTTCTGGGGA TTGATCCAGG CATCCGCACC
GGCTGCAAAA TCGCTATCGT CGACACCACC GGCAAACTGA TCGCAACAGA AACAATCTAC
CCGCACGAGC CGCGGCGCGA GTGGGACAAA TCACTACACA CCCTAAAGAC ACTCTGCACC
CAACATCACG TCACACTGAT TGCCATTGGC AATGGCACCG CAAGCCGCGA GACCGACAAA
CTAGTAAGCG ACCTGATCAA AGCGCATCCT GCATTGAAAC TGCAAAAAAT CGTTGTCAGC
GAATCAGGAG CCTCCGTCTA TTCGGCCTCC GAATCCGCCG CTAAAGAATT CCCCAACCTG
GATGTCTCCT TACGCGGCGC CGTCTCGATT GCACGCCGCC TCCAAGATCC GCTAGCTGAA
CTAGTTAAAA TCGACCCCAA AGCAATCGGA GTTGGGCAAT ACCAACACGA CGTCGACCAA
CTTCACCTCG CCAAAGCCCT GGATGCACGT GTAGAAGACT GCGTCAATGC CGTTGGAGTC
TATGTCAACA CAGCATCCGC AGCATTGCTA TCGCGCGTAT CCGGCCTATC TGCGAGCGTC
GCCGAAAACA TCACTCGCTA TCGCGACGAA CACGGATCAT TCAAACAACG CCAAGACCTG
CTGAAAGTAC CCAGACTCGG CGCAAAGACC TTTGAACAAT GCGCCGGATT CCTTCGTATT
GCTGACAGCA ACCAACCTCT GGACGCCTCT GCAGTACATC CAGAAGCCTA CCCGGTCGTC
GAACGCATTG TGCAAACCAC AGGCAAACCA ATCAAAGCAT TGATTGGCGA TAGCCACACC
TTACGCATGC TCAAACCAGA ACAATTCACT GACACGAACT TCGGAATACC AACCATCCGC
GACATCATCA AAGAACTAGA AAAACCAGGC CGCGACCCAC GTCCAGAATT CAAAGCTGTG
CGATTTACAG AAGGCGTAGA AAACATCAAA GACCTCAAAC CAGGCATGAT CCTCGAAGGA
GTCGTTAGCA ACGTCGCCGC ATTTGGTGCC TTCGTCGATA TTGGAGTACA CCAAGACGGA
TTAATTCACA TATCAGCCCT AGCGGACCGC TTCGTCAAAG ACCCACGTGA CATTGTCAAA
GCGGGCGACA TTGTCAAAGT CAAAGTTTTG GAGATTGATT TACCACGCAA ACGTATCGCA
CTGACCTGCC GCCTCCATGA AGAAACACCA CCAGAAACCC CAGCAGCGAA TAGAACTGGC
AATGAACGCG GCAGACCCAA CCCCGTTGCA AAAAAACTCA AAGCCACACC AACCGACAAC
ACACTCGCAC AAGCCTTCGC ACGTGCACGA CTCAAATGA
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| Protein sequence | MQNSLLTQHI AQIIATEISS QPTQARAAIA LLDEGASVPF IARYRKEATG GLDDTQLRTL
ETRLTYLREL EERRSAILAS ITEQGKLNDL IHAEILAADT KSRLEDLYLT YKPKRRTRAQ
IAREAGLEPL ADSLLTDPTL IPETVAANFV DPEKGITDIK TALEGARVIL IERWGEDAAL
IGELRQWLAN NGVIHARLID NKEDTGAKYR DYFNHTELLS KIPSHRLLAL FRARSEEILH
LDLDPGNDVD AGHQYCESMV MQATCVADQG RPADTWLMTA CRLTWRAKLH MHLMLDLFNQ
AREKAEAEAI TVFSNNLKDL LLAAPAGPRI VLGIDPGIRT GCKIAIVDTT GKLIATETIY
PHEPRREWDK SLHTLKTLCT QHHVTLIAIG NGTASRETDK LVSDLIKAHP ALKLQKIVVS
ESGASVYSAS ESAAKEFPNL DVSLRGAVSI ARRLQDPLAE LVKIDPKAIG VGQYQHDVDQ
LHLAKALDAR VEDCVNAVGV YVNTASAALL SRVSGLSASV AENITRYRDE HGSFKQRQDL
LKVPRLGAKT FEQCAGFLRI ADSNQPLDAS AVHPEAYPVV ERIVQTTGKP IKALIGDSHT
LRMLKPEQFT DTNFGIPTIR DIIKELEKPG RDPRPEFKAV RFTEGVENIK DLKPGMILEG
VVSNVAAFGA FVDIGVHQDG LIHISALADR FVKDPRDIVK AGDIVKVKVL EIDLPRKRIA
LTCRLHEETP PETPAANRTG NERGRPNPVA KKLKATPTDN TLAQAFARAR LK
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