| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1358 |
|---|
| Symbol | |
|---|
| ID | 6119878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1415771 |
|---|
| End bp | 1416823 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641649361 |
|---|
| Product | saccharide biosynthesis regulatory protein |
|---|
| Protein accession | YP_001775918 |
|---|
| Protein GI | 170730485 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAAA GACCCTATTC TCTATGCCTG TTACGCTTAT CAGCACTTGG AGACATCACT
CACGTGTTAC CGCTGGTGCG TACCCTGCAA CGCGAACGCC CCCAAGCACG GTTGCACTGG
ATCATCGATA CCATGGGCAG CAAATTGATG GATGGACTTG ATGGGATACA CCTCCATGTC
TACGACAAGC ATACGGGCTT AAGAGGCATG CGCGCGCTAC GTGCTGAACT CACACCATTA
GGCCACTTCG ATGCACTTTT GCACATGCAA GTGTCATTGC GTGCCAACCT CCTGTCAGCA
TTTGTGCCAG CGCGGCGTCG CATCGGCTAC GACCACAATC GCTCCAAAGA TTTGCATGGC
TTATTCATCA ATGAGCGCAT CCCAGACAAC CCCGGCATCC ATGTGCTAGA TGCGATCGGT
AGCTTCTGCG AACCACTAGG CCTAGTGCAG CGTGAAGTGC GCTGGGATCT GCCAGTGTCT
GAGGAAGCAC GGGCCTGGGC CTGGGCACAG TGGAACAATG ATGGTCGACC AGTATTGATG
ATCTCCCCAT GCTCCAGTCA CACCCATCGA AATTGGCAGG CAAAACGTTA CGCAGCAGTC
GCAGAGCATG CCAGCGCACA AGGCTGGCGG ATCGTCCTAT GTGGTGGCCG CAGCACCCTA
GAACGACAGA CAGCAGACAC CATTTTGGCG CAGACCCAGG TACCACTACT GGATATGGTT
GGCAAAGATA CGCTCAAACA ACTACCCGCC CTTCTTGAAC GTGCCGACCT AGTCATGACC
CCAGACTCTG GGCCGATGCA TATCGCCAAC GCATTAGGTA AAAAAGTATT GGGATTACAT
GCAGCAAGTA ATCCACACCG CAGTGGCCCA TATTCGGACT TGCGTTACTG CGTGAATCGT
TACGATGCGG CTGCACACAA ATACCTAGGC AAACCAAGCA ACATGCTGAA ATGGGGCACC
AAGATCGAGT TCAATGGAGT CATGGACTTG GTAACGGTTG AAGACGCCAT CGCCGCATTC
GAACGCTACC GCGCTGACTA CGCACACCAC TGA
|
|---|
| Protein sequence | MEQRPYSLCL LRLSALGDIT HVLPLVRTLQ RERPQARLHW IIDTMGSKLM DGLDGIHLHV
YDKHTGLRGM RALRAELTPL GHFDALLHMQ VSLRANLLSA FVPARRRIGY DHNRSKDLHG
LFINERIPDN PGIHVLDAIG SFCEPLGLVQ REVRWDLPVS EEARAWAWAQ WNNDGRPVLM
ISPCSSHTHR NWQAKRYAAV AEHASAQGWR IVLCGGRSTL ERQTADTILA QTQVPLLDMV
GKDTLKQLPA LLERADLVMT PDSGPMHIAN ALGKKVLGLH AASNPHRSGP YSDLRYCVNR
YDAAAHKYLG KPSNMLKWGT KIEFNGVMDL VTVEDAIAAF ERYRADYAHH
|
|---|
| |