Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1258 |
Symbol | hemC |
ID | 6121200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1325456 |
End bp | 1326373 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641649269 |
Product | porphobilinogen deaminase |
Protein accession | YP_001775827 |
Protein GI | 170730394 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTAC TTCGTATTGC TACTCGCAAA AGTTTACTTG CTATGCGGCA AAGCGAGTAT GTCGCTGCGC GTTTACGTAT GCTGTGCCCT GATTTAGATG TGGTGTTGGT GCCGATGAGC ACTCGTGGCG ATGAGATCCT GGACCGCTCC CTGGCTGCAA TTGGTGGTAA AGGGCTGTTT CTCAAGGAGC TGGAACTGGC GATGTTACGT GGTGATGCTG ATTGCGCGGT GCATTCGCTG AAAGATGTGC CTATGGATTT GGAGCCCCCA TTTATGCTTG CGGCTGTTTT GAGTCGTGAT GACCCGGCCG ATGCGCTGAT TTCTAATGTC TACCTTTCGC TAGAGTCACT CCCAATTGGG GCGCGTGTGG CGACTTCTTC GCTGCGCCGA CAAGCCCAGT TACGCTTTTA TCGGCCTGAC CTGCGGTTGT TTGACTTGCG GGGTAACGTT AACACGCGCT TGGCGAAGCT TGATAACGGA GATTACGATG CGATTGTGCT GGCTTGTGCG GGGTTACGTC GGCTGGGATT GGAGCAACGC ATGACGGCTC GGCTAGCACC GCCAGAATGG TTACCTGCGC CAGGTCAGGG GGCGATTGCG GTGGAGTCAC TGACCGAGGA TGCTCGGATC GGTACGTTGT TGGCTGGTCT TGACGATCTG CCAACGCGCC AATGCGTGGT GGCTGAGCGT ACGATGAATC GTGCTCTTCA TGGTAGCTGC CATGTGCCAG TGGGGGCTTA TGCATCCTAC GGAGTTGGTG GTATGCGATT ACAGGGCTTG GTGGGTTGTG TTGCCGATGG TCGTCTCGTG CGTGCGGAGC TGTGTTCGGC AAAGGATGAG GGCGATATGC TCGGCAGGGC AGTCGCACAG TGCTTGTTGG ATGCTGGTGC GGCTGAGTTG CTAGCCGCCA CTGCATAG
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Protein sequence | MPLLRIATRK SLLAMRQSEY VAARLRMLCP DLDVVLVPMS TRGDEILDRS LAAIGGKGLF LKELELAMLR GDADCAVHSL KDVPMDLEPP FMLAAVLSRD DPADALISNV YLSLESLPIG ARVATSSLRR QAQLRFYRPD LRLFDLRGNV NTRLAKLDNG DYDAIVLACA GLRRLGLEQR MTARLAPPEW LPAPGQGAIA VESLTEDARI GTLLAGLDDL PTRQCVVAER TMNRALHGSC HVPVGAYASY GVGGMRLQGL VGCVADGRLV RAELCSAKDE GDMLGRAVAQ CLLDAGAAEL LAATA
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