Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1253 |
Symbol | |
ID | 6121195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1319854 |
End bp | 1320888 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641649264 |
Product | twitching motility protein |
Protein accession | YP_001775822 |
Protein GI | 170730389 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTG CTGAACTGTT AGCGTTTTCA GTCAAAAACA ATGCTTCGGA CCTGCACCTG TCAGCAGGCC TGCCACCAAT GATCAGGGTG GACGGCGATG TACGCCGTAT CAATATCCCT GCATTTGACC ATAAGCAGGT GCAATCGCTA ATTTACGACA TCATGTCGGA TAAGCAACGA CGCGACTACG AGGAAGCCCT GGAGACGGAT TTTTCGTTCG AAATCCCTTC ACTCTCCCGC TTCCGTGTCA ATGCATTCAA CCAAGAGCGT GGTGCTGGTG CCGTGTTTCG CACCATTCCC AATAAGGTGA TGACATTGGA CGAACTCGGC TGTTTGCCGG TGTTCCGCAA ACTCATTGAA GAACCGCAGG GGTTGATTCT GGTGACTGGG CCGACTGGCT CTGGAAAATC GACCACCCTC GCAGCCATGA TCGACCATAT CAACAAAAAT GCTCACGGGC ATATTCTCAC GATAGAGGAC CCGATTGAGT TCGTTCACAC CTCACAGAAG TGCTTGATTA ACCAACGTGA GGTACATCGC GATACTCACG ACTTCAACAA AGCACTCAGC TCAGCACTGC GCGAAGATCC AGACATCATC TTGATTGGAG AATTGCGTGA CCTGGAAACG ATCCGTCTAG CACTGACTGC AGCCGAAACT GGCCACTTGG TATTTGGCAC CCTGCACACC AATTCAGCAG CGAAAAGTAT TAACCGCATC ATCGACGTGT TTCCCGCTGC TGAAAAACCG ATGGTCCGCT CAATGCTTTC CGAATCGCTC TGCGGGATCA TCTCACAAAT GTTGTTGAAA AAAGTTGGTG GTGGACGTAC CGCAGCCTGG GAAATTATGG TTGGCACCCC CGCAATCCGA AATTTGATCC GTGAGGATAA AGTCGCACAG ATGTATTCAT CCATCCAAAC TGGCCAGCAA TATGGCATGC AAACCCTTGA CCAGCATTTG CAGGATCTCA TCAAACGCAA CCTGATCACA CGACAGCAAG CACGTGAATA CGCCAAGGAT AAAGCGAATT TTTGA
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Protein sequence | MDIAELLAFS VKNNASDLHL SAGLPPMIRV DGDVRRINIP AFDHKQVQSL IYDIMSDKQR RDYEEALETD FSFEIPSLSR FRVNAFNQER GAGAVFRTIP NKVMTLDELG CLPVFRKLIE EPQGLILVTG PTGSGKSTTL AAMIDHINKN AHGHILTIED PIEFVHTSQK CLINQREVHR DTHDFNKALS SALREDPDII LIGELRDLET IRLALTAAET GHLVFGTLHT NSAAKSINRI IDVFPAAEKP MVRSMLSESL CGIISQMLLK KVGGGRTAAW EIMVGTPAIR NLIREDKVAQ MYSSIQTGQQ YGMQTLDQHL QDLIKRNLIT RQQAREYAKD KANF
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