Gene Xfasm12_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1243 
Symbol 
ID6120466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1307727 
End bp1310318 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content52% 
IMG OID641649256 
Producthypothetical protein 
Protein accessionYP_001775814 
Protein GI170730381 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA ACAGCAGCAC CCACAACATC CACCGCCAAT CTGGCTGGCG CCGTGCCATA 
CCGGTATTCA TCAGTCTGCT CATTCTCGGC ATGGCGTTAC ATGCGTTGTC TGGCCACTTT
ACTAATCATG GCTATCACCA GATCCGCTTA GCATTCAAAG CATTTACCAC TTGGCAAATC
GTACTGACCC TAGTACTTGG GCTATGTAGC TACGCTTGCT TGGTAGGCTT CGATTGGATC
GGTTTACAAC GTACCGGCAA ACGTCCACAT CCTGCACGGG TGGCGATTAC CGCCTTCCTC
GCCCACACAA TCGGCCAGAC ATTGGGCTTT GCCGCACTGA CAGGTGGTGC AGTGCGGTTA
CGTGGCTACA GCAAAGTGGG ACTGAGCCTC ATTGAAATCG GCCAAATAGT ATTGATGAGC
ACCTTGGGCT TCATATTTGG TGCTTGGGTA CTACTGGGCT TGGCATTAGC ACTCGAACCC
GCCACAGCGA CACCAATACT GCCACTGGAC ACACTAGGGA TCCGCAGCAC AGGTATTGCC
TTACTCGCCG CATTCCTAGT GATGTTGTGG CTTGTTAACA GCAACGGTCG AGAGTTCGGC
ATCGGTCGGC AACGCTTTTG GATACCGGAT AGACGCACCG TGCTAGGCGT CACTGCACTC
AGTATCGTCG AATTAGGTCT AGCTTGCGCC GCATTCTATG TGCTATTGCC ATCAGAAGCG
AACACAAGCT TCTTCGGCTT CATCGGCCTA TGGCTAGTTG CTGTTGTCGC CGGGTTGATA
TCCACAGTGC CGGCTGGACT GGGTGTCTTC GAATGGAGCA TGCTCAAACT TCTGCCTCAC
ACTCCGCCTA GCGTAGTACT GGCAGCAGCG TTGGCCTATC GCATTACCTA TTACGTCTTG
CCTACCCTCA TTGCGCTGAC GATGGCTGCA AGTAGCGGTC TGCGCCAACC AATGCGAGTC
AGCGCCGGCA CCGCAATTGC AATCTGGAAG ACCGTACGCC CCTGGGTCCC CCAAATTATC
GCACTAGCCG TTTTTGCAAT CGGTACGATA CTGCTGGTTG ATGGCACCTT ACCGACACCA
AAATCACGAC AAGAGGTCGC CCCCCTCCCC CTCATTGAGA CTTCACATTT ACTAGTTAGT
CTCGGTGGCA TTGTCCTATT ACTCATTGGC CAAGGGCTGC AACGACGTAG CCACTCAGCT
TGGCTGCTAG CCTTAGGCAT CTGCATATTA CTCCCGCCAC TGGCGCTGTT ACGTGGTAGC
CACTACTCGG TTTCACTGTG GGCTGGCCTG ACCGCAGTAA CACTTTGGAT GGCGCGGCGC
GAGTTTTACC GCCAAAGTGC CCTGCTCGAC GAAGCTTGGT CGTGGCGCTG GTTGAGCAAT
ATAGGCATCG TCATAGTAAG CACCTTCTGG CTAGTGTTCT TCGTCTATAG CCACGTTGAG
TACAGCAACG ACTTGTGGTG GGAGTTTGCA ACCTCTGGAA ACGCGCCGCG CGCACTACGT
GCATTGTTAT TGATATGTAT TTGCCTCATC GTGTTCGGTA TGGCGCGTTT ACTGCATAAC
GCCCGGCAGC CCTTCACACC AGCCAGTGAA GCTGAGTTGC AAGCCTTATT GCCGATACTC
GCCAATAACA AAGACACCAA AGCCTGCCTG GCCATGACAG GGGACAAGGC GTTACTACAC
GACCCACAGA AACACAGCTT CGTGATGATG CAGCGCTACG GCGGTTCACT GATCGCAATG
GGTGACCCCA TTGGGCCACC TGAAGCAGCG ATCCAACTGA TCTGGCGCTT CCGTGAAGTC
GCTGACCGCC TTGGATTACG CCCAGTGTTT TATCAAGTCT CCGACAACTA TTGGAAAAAT
TACTTAGATC TAGGCATGAC TATGGTCAAG ATCGGAGAAG AAGCAATCGT TGACCTTGAA
AAATTCAGCC TCGAAGGGCC TACTAACGCC GAAATGCGGC GAGCATTCAA CAAAGGGAAA
CGACTGGGAT TGCGTTTTCG TATTCTTTCG GAAGAAGAAG TCAGAGCACT GATACATAGG
CTCCGTCAGA TCTCTGACGA ATGGCTGGAA GAAAAAGGCA GCGAAGAGAA AAGTTTTTCT
CTAGGAAATT TCGATCCCAT CTACCTATAT CGCTTTCCAG TCGCGGTGAT TGAGCATGAA
GCTGAACAGA AAATAATTGC ATTTGCAAAC ATTTTAAAAG CACAACCAGG CAGCGAGCTA
TCAATAGACT TGATGCGATA TAGCCAAGAC GCACCTAATG GCACGATGGA CTTTTTGTTC
GTAGCCATGT TGCTGTGGGG AAAAGAGCAA GGTTTTCAAC GGTTTTCTTT AGGAATGGCG
CCACTATCAG GCTTAGCGCA ACATCATTTA GCGGGGCGCT GGAATCGGTT CGCCAACCTA
ATCGCACGGC ATGGCGAACG CTTCTACGGT TTCAGTGGTC TACGTCGCTT CAAAGCCAAA
TTCTCACCCA ATTGGTGTCC CCGCTACTTA GCGGCACCTG GGGGTATGCA CCTTTTTGCA
GCATTACTTG ATGTCACCAG GCTGATTTCC ATCAGCCCCA AACGCCGCGA GGACAATTGC
AATCAAATTT AA
 
Protein sequence
MTDNSSTHNI HRQSGWRRAI PVFISLLILG MALHALSGHF TNHGYHQIRL AFKAFTTWQI 
VLTLVLGLCS YACLVGFDWI GLQRTGKRPH PARVAITAFL AHTIGQTLGF AALTGGAVRL
RGYSKVGLSL IEIGQIVLMS TLGFIFGAWV LLGLALALEP ATATPILPLD TLGIRSTGIA
LLAAFLVMLW LVNSNGREFG IGRQRFWIPD RRTVLGVTAL SIVELGLACA AFYVLLPSEA
NTSFFGFIGL WLVAVVAGLI STVPAGLGVF EWSMLKLLPH TPPSVVLAAA LAYRITYYVL
PTLIALTMAA SSGLRQPMRV SAGTAIAIWK TVRPWVPQII ALAVFAIGTI LLVDGTLPTP
KSRQEVAPLP LIETSHLLVS LGGIVLLLIG QGLQRRSHSA WLLALGICIL LPPLALLRGS
HYSVSLWAGL TAVTLWMARR EFYRQSALLD EAWSWRWLSN IGIVIVSTFW LVFFVYSHVE
YSNDLWWEFA TSGNAPRALR ALLLICICLI VFGMARLLHN ARQPFTPASE AELQALLPIL
ANNKDTKACL AMTGDKALLH DPQKHSFVMM QRYGGSLIAM GDPIGPPEAA IQLIWRFREV
ADRLGLRPVF YQVSDNYWKN YLDLGMTMVK IGEEAIVDLE KFSLEGPTNA EMRRAFNKGK
RLGLRFRILS EEEVRALIHR LRQISDEWLE EKGSEEKSFS LGNFDPIYLY RFPVAVIEHE
AEQKIIAFAN ILKAQPGSEL SIDLMRYSQD APNGTMDFLF VAMLLWGKEQ GFQRFSLGMA
PLSGLAQHHL AGRWNRFANL IARHGERFYG FSGLRRFKAK FSPNWCPRYL AAPGGMHLFA
ALLDVTRLIS ISPKRREDNC NQI