Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1243 |
Symbol | |
ID | 6120466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1307727 |
End bp | 1310318 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649256 |
Product | hypothetical protein |
Protein accession | YP_001775814 |
Protein GI | 170730381 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA ACAGCAGCAC CCACAACATC CACCGCCAAT CTGGCTGGCG CCGTGCCATA CCGGTATTCA TCAGTCTGCT CATTCTCGGC ATGGCGTTAC ATGCGTTGTC TGGCCACTTT ACTAATCATG GCTATCACCA GATCCGCTTA GCATTCAAAG CATTTACCAC TTGGCAAATC GTACTGACCC TAGTACTTGG GCTATGTAGC TACGCTTGCT TGGTAGGCTT CGATTGGATC GGTTTACAAC GTACCGGCAA ACGTCCACAT CCTGCACGGG TGGCGATTAC CGCCTTCCTC GCCCACACAA TCGGCCAGAC ATTGGGCTTT GCCGCACTGA CAGGTGGTGC AGTGCGGTTA CGTGGCTACA GCAAAGTGGG ACTGAGCCTC ATTGAAATCG GCCAAATAGT ATTGATGAGC ACCTTGGGCT TCATATTTGG TGCTTGGGTA CTACTGGGCT TGGCATTAGC ACTCGAACCC GCCACAGCGA CACCAATACT GCCACTGGAC ACACTAGGGA TCCGCAGCAC AGGTATTGCC TTACTCGCCG CATTCCTAGT GATGTTGTGG CTTGTTAACA GCAACGGTCG AGAGTTCGGC ATCGGTCGGC AACGCTTTTG GATACCGGAT AGACGCACCG TGCTAGGCGT CACTGCACTC AGTATCGTCG AATTAGGTCT AGCTTGCGCC GCATTCTATG TGCTATTGCC ATCAGAAGCG AACACAAGCT TCTTCGGCTT CATCGGCCTA TGGCTAGTTG CTGTTGTCGC CGGGTTGATA TCCACAGTGC CGGCTGGACT GGGTGTCTTC GAATGGAGCA TGCTCAAACT TCTGCCTCAC ACTCCGCCTA GCGTAGTACT GGCAGCAGCG TTGGCCTATC GCATTACCTA TTACGTCTTG CCTACCCTCA TTGCGCTGAC GATGGCTGCA AGTAGCGGTC TGCGCCAACC AATGCGAGTC AGCGCCGGCA CCGCAATTGC AATCTGGAAG ACCGTACGCC CCTGGGTCCC CCAAATTATC GCACTAGCCG TTTTTGCAAT CGGTACGATA CTGCTGGTTG ATGGCACCTT ACCGACACCA AAATCACGAC AAGAGGTCGC CCCCCTCCCC CTCATTGAGA CTTCACATTT ACTAGTTAGT CTCGGTGGCA TTGTCCTATT ACTCATTGGC CAAGGGCTGC AACGACGTAG CCACTCAGCT TGGCTGCTAG CCTTAGGCAT CTGCATATTA CTCCCGCCAC TGGCGCTGTT ACGTGGTAGC CACTACTCGG TTTCACTGTG GGCTGGCCTG ACCGCAGTAA CACTTTGGAT GGCGCGGCGC GAGTTTTACC GCCAAAGTGC CCTGCTCGAC GAAGCTTGGT CGTGGCGCTG GTTGAGCAAT ATAGGCATCG TCATAGTAAG CACCTTCTGG CTAGTGTTCT TCGTCTATAG CCACGTTGAG TACAGCAACG ACTTGTGGTG GGAGTTTGCA ACCTCTGGAA ACGCGCCGCG CGCACTACGT GCATTGTTAT TGATATGTAT TTGCCTCATC GTGTTCGGTA TGGCGCGTTT ACTGCATAAC GCCCGGCAGC CCTTCACACC AGCCAGTGAA GCTGAGTTGC AAGCCTTATT GCCGATACTC GCCAATAACA AAGACACCAA AGCCTGCCTG GCCATGACAG GGGACAAGGC GTTACTACAC GACCCACAGA AACACAGCTT CGTGATGATG CAGCGCTACG GCGGTTCACT GATCGCAATG GGTGACCCCA TTGGGCCACC TGAAGCAGCG ATCCAACTGA TCTGGCGCTT CCGTGAAGTC GCTGACCGCC TTGGATTACG CCCAGTGTTT TATCAAGTCT CCGACAACTA TTGGAAAAAT TACTTAGATC TAGGCATGAC TATGGTCAAG ATCGGAGAAG AAGCAATCGT TGACCTTGAA AAATTCAGCC TCGAAGGGCC TACTAACGCC GAAATGCGGC GAGCATTCAA CAAAGGGAAA CGACTGGGAT TGCGTTTTCG TATTCTTTCG GAAGAAGAAG TCAGAGCACT GATACATAGG CTCCGTCAGA TCTCTGACGA ATGGCTGGAA GAAAAAGGCA GCGAAGAGAA AAGTTTTTCT CTAGGAAATT TCGATCCCAT CTACCTATAT CGCTTTCCAG TCGCGGTGAT TGAGCATGAA GCTGAACAGA AAATAATTGC ATTTGCAAAC ATTTTAAAAG CACAACCAGG CAGCGAGCTA TCAATAGACT TGATGCGATA TAGCCAAGAC GCACCTAATG GCACGATGGA CTTTTTGTTC GTAGCCATGT TGCTGTGGGG AAAAGAGCAA GGTTTTCAAC GGTTTTCTTT AGGAATGGCG CCACTATCAG GCTTAGCGCA ACATCATTTA GCGGGGCGCT GGAATCGGTT CGCCAACCTA ATCGCACGGC ATGGCGAACG CTTCTACGGT TTCAGTGGTC TACGTCGCTT CAAAGCCAAA TTCTCACCCA ATTGGTGTCC CCGCTACTTA GCGGCACCTG GGGGTATGCA CCTTTTTGCA GCATTACTTG ATGTCACCAG GCTGATTTCC ATCAGCCCCA AACGCCGCGA GGACAATTGC AATCAAATTT AA
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Protein sequence | MTDNSSTHNI HRQSGWRRAI PVFISLLILG MALHALSGHF TNHGYHQIRL AFKAFTTWQI VLTLVLGLCS YACLVGFDWI GLQRTGKRPH PARVAITAFL AHTIGQTLGF AALTGGAVRL RGYSKVGLSL IEIGQIVLMS TLGFIFGAWV LLGLALALEP ATATPILPLD TLGIRSTGIA LLAAFLVMLW LVNSNGREFG IGRQRFWIPD RRTVLGVTAL SIVELGLACA AFYVLLPSEA NTSFFGFIGL WLVAVVAGLI STVPAGLGVF EWSMLKLLPH TPPSVVLAAA LAYRITYYVL PTLIALTMAA SSGLRQPMRV SAGTAIAIWK TVRPWVPQII ALAVFAIGTI LLVDGTLPTP KSRQEVAPLP LIETSHLLVS LGGIVLLLIG QGLQRRSHSA WLLALGICIL LPPLALLRGS HYSVSLWAGL TAVTLWMARR EFYRQSALLD EAWSWRWLSN IGIVIVSTFW LVFFVYSHVE YSNDLWWEFA TSGNAPRALR ALLLICICLI VFGMARLLHN ARQPFTPASE AELQALLPIL ANNKDTKACL AMTGDKALLH DPQKHSFVMM QRYGGSLIAM GDPIGPPEAA IQLIWRFREV ADRLGLRPVF YQVSDNYWKN YLDLGMTMVK IGEEAIVDLE KFSLEGPTNA EMRRAFNKGK RLGLRFRILS EEEVRALIHR LRQISDEWLE EKGSEEKSFS LGNFDPIYLY RFPVAVIEHE AEQKIIAFAN ILKAQPGSEL SIDLMRYSQD APNGTMDFLF VAMLLWGKEQ GFQRFSLGMA PLSGLAQHHL AGRWNRFANL IARHGERFYG FSGLRRFKAK FSPNWCPRYL AAPGGMHLFA ALLDVTRLIS ISPKRREDNC NQI
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