| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1238 |
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| Symbol | |
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| ID | 6120460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1300597 |
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| End bp | 1303173 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641649250 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001775809 |
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| Protein GI | 170730376 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAC ATACCCCACT GATGAAGCAA TACTTCGCCG CCAAGGCTGA GTATCCAGAC
TTACTTTTGT TCTTCCGTAT GGGAGATTTT TACGAGCTTT TTCATCAAGA TGCCCGCAAG
GCAGCGCGGT TACTCGATAT CACGTTGACT CAGCGGGGTA GTTCCGGTGG TACTCCGATC
CCAATGGCCG GTGTACCCGT TCATGCCTAT GAAGGCTATT TGGCGCGGCT CATTGCCCTG
GGTGAATCCG TTGCGATTTG CGAACAAATT GGAGATCCAG GGCTTGCTAA AGGGTTGGTT
GAACGTAAGG TGGTACGCAT CGTCACTCCA GGTACGATCA CTGACGAGGC GTTACTGGAG
GAGCGTCGCG ACACTCTATT GATGGCCTTA TCACGCACTA AAAACTGTTA TGGCTTGGCT
TGGGCTGACT TAGCCGGTGG CCGTTTCCTG GTGAACGAAG TCGATAGCGA GGAGGCATTA
GAAGCCGAAC TCGCACGTCT GGAGCCAGCT GAGCTGTTAC TCCCTGACGA GGATGCATGG
CCAGAGTATC TACAGCAGCG CAGCGGTGTG CGTCGCCGTC CCCCATGGTT GTTTGATGCT
GACAGCGGCC GCCGTAAATT ACTGGCGTTT TTCAAACTGC ACGATTTATC CGGCTTCGGT
ATCGAAAATA ATCCACAAGC TACTGCTGCG GCGGGTGCAC TTCTTGGCTA CATTGAGGAG
ACACAGAAGC AGCGTCTGCC GCATCTGACT TCAATTACGA TGGAGACTGT TGGCGAAGCG
ATTACGATGA ACGCTGCCAC ACGTCGCCAT TTGGAGCTGG ACACCCGTGT GGATGGGGAG
AGCCGTCACA CCTTGCTTGG GGTGCTCGAT AGTACGGTGA CCCCGATGGG CGGACGGTTG
CTGCGGCGGT GGCTGCATCG GCCGCTGCGG CTGCGCGAGG TGGTAAGACA ACGTCATGCT
GCCGTCGGGA GCATGATCTA TATCGATCTC GATAACAAAC TCAGGGAGAC TTTCCGCAGG
CTTGGCGACA TGGAGCGGAT TTTGACCCGC GTGGCATTGC GCTCAGCACG TCCACGTGAC
ATCTCCACAT TACGGGATAG CCTCAGCCTC CTGCCACGTT TACGTGAGCT TCTCAATGCA
TCGGATTCCC CGCGCTTGCG CGTGTTGTAC GCCGAGCTGG GTGAGCATGA CAGCACCGCG
TCTTTATTGG TAAAAGCCGT CGCAGAACAG CCACCCTTAA AGCTGACTGA TGGCGGTGTG
ATTGCCCCAG AATACGATGT CGAATTGGAC GAACTGCGTA AGCTCTCCAA CAACGCGGAT
CAGTTCTTGA TTGATCTTGA GACACGCGAG CGTGAATCCA GTGGTATTTC TACGCTGAAA
GTCGGTTACA ACCGTGTACA TGGTTACTAT ATTGAGATCA GCAAGGGCCA AGCCGACAAA
GCACCGGTGC ATTACACTCG ACGCCAGACA CTGACTAACG CCGAGCGCTA CATCACGGAG
GAACTGAAAG CGTTCGAAGA CAAAGTATTA TCCGCGCGTG ATCGTGCGTT GGCGCGGGAA
AAATTGTTGT ACGAACAGCT GCTGGACACC GTCGGGGCGC AACTGGAACC GCTGAAGCGT
TGTGCGGCTG CGCTATCTGA GCTAGATGTA CTGGTCTGCT TTGCCGAGCG TGCACAGACA
TTGGATTGGG CGCGTCCGGA GTTGGAGCAT ACATCATGCT TGCATATTGA GGGTGGCCGT
CACCCGGTTG TGGAAGCCGT GCGTGAACAG CGATTCGAGC CGAATGACAT CGATCTTCAC
CCTGAGCGCC GCATGTTGGT TATCACCGGA CCCAATATGG GAGGCAAGTC GACCTACATG
CGCCAGAATG CCTTGATTGT CCTGCTTGCT TATATCGGCA GCTACGTTCC GGCCAGCCGC
GCGCTGATTG GACCGATTGA CCGCATCATG ACCCGTATCG GTGCTGGTGA TGACCTGGCC
CGAGGTCAGT CGACATTTAT GCTTGAGATG ACAGAGACCA GCTACATTCT GCACCATGCG
ACCGCGCAGT CGCTGGTACT GATGGACGAA ATTGGTCGGG GGACCTCGAC TTACGATGGC
TTGGCGTTGG CGGATGCAGT CGCACGCCAC TTAGCTCATA TCAACCGTTG TTATACGCTG
TTTGCTACGC ATTATTTTGA GCTGACTGCA CTAGCCGACG AAACATATGA GGGAGGTCTG
AGCGGTATCG CTAACGTGCA TTTCGATGCT GTCGAGCATA GTGAACGCTT GGTCTTCATG
CACACAGTGA AGGATGGCCC GGCCAATCGC AGTTTTGGCC TACAGGTGGC TGCTTTGGCT
GGTCTACCAG CTGCGGCCGT CGCACACGCA CGGCGGCGTT TAGCTGAACT GGAGCAGCGA
GGCCGTGAAA GTCATGTTTC AGAAATAACA CCGCTGGCAT TGGATGCACC GCAGCAGTGC
AGTTTATTTG CGTCGGCGCC CTCAGCAGCT CAGGAAGCAT TGGTTGCATT GCATCCGGAT
GAGTTGACCC CTAAGCAAGC ACTAGAAGCG CTTTACCGAC TCAAAGCGCT GCTATAA
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| Protein sequence | MAEHTPLMKQ YFAAKAEYPD LLLFFRMGDF YELFHQDARK AARLLDITLT QRGSSGGTPI
PMAGVPVHAY EGYLARLIAL GESVAICEQI GDPGLAKGLV ERKVVRIVTP GTITDEALLE
ERRDTLLMAL SRTKNCYGLA WADLAGGRFL VNEVDSEEAL EAELARLEPA ELLLPDEDAW
PEYLQQRSGV RRRPPWLFDA DSGRRKLLAF FKLHDLSGFG IENNPQATAA AGALLGYIEE
TQKQRLPHLT SITMETVGEA ITMNAATRRH LELDTRVDGE SRHTLLGVLD STVTPMGGRL
LRRWLHRPLR LREVVRQRHA AVGSMIYIDL DNKLRETFRR LGDMERILTR VALRSARPRD
ISTLRDSLSL LPRLRELLNA SDSPRLRVLY AELGEHDSTA SLLVKAVAEQ PPLKLTDGGV
IAPEYDVELD ELRKLSNNAD QFLIDLETRE RESSGISTLK VGYNRVHGYY IEISKGQADK
APVHYTRRQT LTNAERYITE ELKAFEDKVL SARDRALARE KLLYEQLLDT VGAQLEPLKR
CAAALSELDV LVCFAERAQT LDWARPELEH TSCLHIEGGR HPVVEAVREQ RFEPNDIDLH
PERRMLVITG PNMGGKSTYM RQNALIVLLA YIGSYVPASR ALIGPIDRIM TRIGAGDDLA
RGQSTFMLEM TETSYILHHA TAQSLVLMDE IGRGTSTYDG LALADAVARH LAHINRCYTL
FATHYFELTA LADETYEGGL SGIANVHFDA VEHSERLVFM HTVKDGPANR SFGLQVAALA
GLPAAAVAHA RRRLAELEQR GRESHVSEIT PLALDAPQQC SLFASAPSAA QEALVALHPD
ELTPKQALEA LYRLKALL
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