| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1205 |
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| Symbol | |
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| ID | 6120425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1271071 |
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| End bp | 1272630 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649222 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001775784 |
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| Protein GI | 170730351 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACACGG GCATATCCAG CCAGCCACCC TGTATCCGAA TTTTTGATAC CACCCTGCGG
GACGGTGAGC AATCTCCCGG TTGCAGTATG CCTGCACAAC AAAAACTGGT CATGGCGCGC
GCATTAGATG CATTGGGCGT AGACATTATC GAGACTGGTT TCCCAGCCAG TTCCCAATCC
GACTACGAAG CCATGACGCT GATCGCACGC GAGTTACGTA GACCAACTCT GGCAGTACTG
TCACGTTGTC TGCAAGCCGA TATCGAAACT TCAGCACGCG CACTGGAATC AGCAACCAAA
CCACGCTTGC ATGTGTTTCT GTCAACCAGC CCATTACACC GCGAGCACAA GCTACGCATG
AGCAAGGAAC AGGTGCTGGA GTCAGTGCAC AAGCATGTGA GTCTCAGTCG AACCTTGATT
GACGATGTGG AATTCTCGGC CGAGGATGCG ACGCGCACTG AGGAGGATTT CCTGATAGAG
GTTACCCGCG TGGCAATCGC CGCTGGTGCA ACCACGATCA ACCTGCCAGA CACCGTAGGG
TTCAGCACGC CTGAAGAAAT CCGCAACATG TTTACGCGCG TCATCGCCAA CGTCGAAGGT
GCAAACAAAG TGATCTTTAG TGCGCACTGC CACGACGATC TGGGTTTGGC CGTTGCTAAC
TCGCTGGCAG CCATTGAGGG CGGTGCACGC CAAATCGAAT GTACTATCAA CGGCATTGGT
GAGCGCGCTG GTAACTGCGC GCTGGAAGAA CTCACTATGG TGTTGAAAGT ACGCAACGCG
TTTTACAACA TTGATACTTC AATCCACACA TCACGTATCG TCTCCACCTC CCAGTTACTG
CAACGATTGG TTGGCATGCC CGTGCAACGT AACAAGGCAG TAGTAGGTGC CAATGCCTTT
GCACATGAAT CGGGTATCCA CCAGCACGGT ATGCTGCGCC ATCGCGGCAC CTACGAAATC
ATGCGTCCAC AAGAAGTCGG TTGGGTATGT TCGCACATGG TGCTCGGCCG CCATAGCGGC
CGTGCTGCGG TCGAACAGCG TCTACGCGCA CTGGGCTACT TGCTGGAGGA AGAAGATCTA
AAACTGGTAT TTGAAGAATT CAAACAGCTT TGTGAGAAAC AGCGTTTGGT CACCGATGTC
GACCTGCAAG TACTGATGCA AGATACAACA GTACAGCATG GCTATCGCTT GGCCTCAATG
ACAATCAGTG ATGTTGGTAA TCAGGCCAAC GCACTGGTGG AATTGTCCAA TCCCCAAGGT
CAGCGTGTGG CTGAAACTGC GCAAGGCAAC GGCCCAGTAG ATGCACTGTT CGGAGCGCTG
GCTGCAGCAA CCGGGGTCAA ACTGGAGTTG GACAGCTATC AGGTACACAG TGTTGGTATC
GGGGCCGATG CACGTGGTGA AGCCAACCTC AGTGTACGCC ACAACGATAC TCAGTACGAA
GGTACAGGGA CCAGTAAAGA CATTATCGAA GCCAGTGCGC TCGCTTGGCT AGACGTCGCC
AACCGTTTGC TACGTAACCC CGAAAATATG CAAAATAAAC AAAACACAGC ACTGGCCTGA
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| Protein sequence | MNTGISSQPP CIRIFDTTLR DGEQSPGCSM PAQQKLVMAR ALDALGVDII ETGFPASSQS
DYEAMTLIAR ELRRPTLAVL SRCLQADIET SARALESATK PRLHVFLSTS PLHREHKLRM
SKEQVLESVH KHVSLSRTLI DDVEFSAEDA TRTEEDFLIE VTRVAIAAGA TTINLPDTVG
FSTPEEIRNM FTRVIANVEG ANKVIFSAHC HDDLGLAVAN SLAAIEGGAR QIECTINGIG
ERAGNCALEE LTMVLKVRNA FYNIDTSIHT SRIVSTSQLL QRLVGMPVQR NKAVVGANAF
AHESGIHQHG MLRHRGTYEI MRPQEVGWVC SHMVLGRHSG RAAVEQRLRA LGYLLEEEDL
KLVFEEFKQL CEKQRLVTDV DLQVLMQDTT VQHGYRLASM TISDVGNQAN ALVELSNPQG
QRVAETAQGN GPVDALFGAL AAATGVKLEL DSYQVHSVGI GADARGEANL SVRHNDTQYE
GTGTSKDIIE ASALAWLDVA NRLLRNPENM QNKQNTALA
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