Gene Xfasm12_1194 details

Gene Information

• Locus tag: Xfasm12_1194
• ID: 6120414
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 1259857
• End bp: 1260525
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641649213
• Product: hypothetical protein
• Protein accession: YP_001775775
• Protein GI: 170730342
• COG category: [R] General function prediction only
• COG ID: [COG2945] Predicted hydrolase of the alpha/beta superfamily

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.410883
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATGC CCAATCCAGT ACTCCCCAAC ACGTCCGGCA CTCTATTTTT AGAAGGTCCA 
GTGGGTTGCC TTGAAGTTGC AGTGGACTTT CCAGCGTTCA ATGTCACTAC ACAGTCACCT 
GTTGCGATTA TTTGCCATCC GCTCTCTACC GAGGGAGGGA GCATGGATAA CAAAGTTGTC 
ACCATGACTG CACGCGCATT GCGTGAATTA GGCATGATGA CTGTGCGATT TAATTTCCGT 
AGTGTTGGTG CCTCAGATGG CATGTTTGAT AACGGCCATG GTGAACGCGC AGACTTGCGT 
GCAATAGCGG CTTGGGTACG TGCACAGCGA CCTGACAGTG CATTGTGGTT AGCCGGTTTC 
AGCTTTGGAG CTTACATATC GTTGCTTGTT GCTGAAGAAT TGGAAACGCA AGTGTTGATT 
TCAATCTCAC CACCGGCTGG GCGCTGGGAC TTCAGTCATG TACATCCCCC TGAACATTGG 
CTGTTAATCC AAGGTGATGC TGACGAAGTT GTTGACCCTC AAGCTGTCTA TGACTGGATC 
TCCACATTAC CGCGTCAGCC TAAACTGATA CGCATGCCTG AGACCAGCCA CTTTTTTCAC 
CGCAAGTTGA TTCATTTACG CGATGCCATC CAAGATGGTG TGCGCAGCTG GCTACCACAG 
CTGGCATAG 

 

Protein sequence

MAMPNPVLPN TSGTLFLEGP VGCLEVAVDF PAFNVTTQSP VAIICHPLST EGGSMDNKVV 
TMTARALREL GMMTVRFNFR SVGASDGMFD NGHGERADLR AIAAWVRAQR PDSALWLAGF 
SFGAYISLLV AEELETQVLI SISPPAGRWD FSHVHPPEHW LLIQGDADEV VDPQAVYDWI 
STLPRQPKLI RMPETSHFFH RKLIHLRDAI QDGVRSWLPQ LA