Gene Xfasm12_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1173 
Symbol 
ID6119698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1241351 
End bp1241920 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID641649192 
Producthypothetical protein 
Protein accessionYP_001775754 
Protein GI170730321 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00228603 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGC GCCCCTACCA ACACACCATC GTTGATTTCA TCCTGACGCA CCCACGCTGC 
AATCTATTCG TGCCAATGGG TTTAGGAAAG ACGGTGGCAA CGCTGACGGC GTTAGATGTG
CTCCTGGTGG TCGAAGACAT TGCGCCTATT TTGGTGATTG CTCCGCTGCG CGTTGCTGCC
ACGACATGGC CGGATGAGGT GGCCAAGTTC CCCCATTTGC GCCATCTGCG GGTGTCCGTG
GTCGTGGGTA GTGCGGCGGC ACGTCGCCAC GCCTTGGAGC AGGACGCGGA TATCTACTGC
ATTAATTACG ACAATCTGAA ATGGTTAGTA GAGTTTTATC AGGACCGTTG GCCGTTCCGT
ATGGTGGTCG CCGATGAGTG CTCCAAGCTG AAAGGGTTCC GACTGCGGCA AGGAACACGG
CGGGCCCGCG CACTGGCCAA GCATGTGCAT ACCAAGGTGG AGCGCTACAT TGGGTTGACC
GGCACGCCCG CGCCGAATGG GCTACAGGAC CTGTGGGCGT TGATGTGGAT GGTGGATCGT
GCAGCGTGTT GTTCTTTCGG TGTGCGATAG
 
Protein sequence
MNLRPYQHTI VDFILTHPRC NLFVPMGLGK TVATLTALDV LLVVEDIAPI LVIAPLRVAA 
TTWPDEVAKF PHLRHLRVSV VVGSAAARRH ALEQDADIYC INYDNLKWLV EFYQDRWPFR
MVVADECSKL KGFRLRQGTR RARALAKHVH TKVERYIGLT GTPAPNGLQD LWALMWMVDR
AACCSFGVR