Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1173 |
Symbol | |
ID | 6119698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1241351 |
End bp | 1241920 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641649192 |
Product | hypothetical protein |
Protein accession | YP_001775754 |
Protein GI | 170730321 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00228603 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC GCCCCTACCA ACACACCATC GTTGATTTCA TCCTGACGCA CCCACGCTGC AATCTATTCG TGCCAATGGG TTTAGGAAAG ACGGTGGCAA CGCTGACGGC GTTAGATGTG CTCCTGGTGG TCGAAGACAT TGCGCCTATT TTGGTGATTG CTCCGCTGCG CGTTGCTGCC ACGACATGGC CGGATGAGGT GGCCAAGTTC CCCCATTTGC GCCATCTGCG GGTGTCCGTG GTCGTGGGTA GTGCGGCGGC ACGTCGCCAC GCCTTGGAGC AGGACGCGGA TATCTACTGC ATTAATTACG ACAATCTGAA ATGGTTAGTA GAGTTTTATC AGGACCGTTG GCCGTTCCGT ATGGTGGTCG CCGATGAGTG CTCCAAGCTG AAAGGGTTCC GACTGCGGCA AGGAACACGG CGGGCCCGCG CACTGGCCAA GCATGTGCAT ACCAAGGTGG AGCGCTACAT TGGGTTGACC GGCACGCCCG CGCCGAATGG GCTACAGGAC CTGTGGGCGT TGATGTGGAT GGTGGATCGT GCAGCGTGTT GTTCTTTCGG TGTGCGATAG
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Protein sequence | MNLRPYQHTI VDFILTHPRC NLFVPMGLGK TVATLTALDV LLVVEDIAPI LVIAPLRVAA TTWPDEVAKF PHLRHLRVSV VVGSAAARRH ALEQDADIYC INYDNLKWLV EFYQDRWPFR MVVADECSKL KGFRLRQGTR RARALAKHVH TKVERYIGLT GTPAPNGLQD LWALMWMVDR AACCSFGVR
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